Table 1.
Gene | GenBank accession no. | Amplicon size (bp) | Direction | Sequence | Location |
---|---|---|---|---|---|
PER1 | AF022991 | 102 | F | 5′‐CAT CAC GTC TGA GTA CAC ACT TCA GA‐3′ | 808–833 |
P | 5′‐CGA ATC GTC TAC ATT TC‐3′ | 875–891 | |||
R | 5′‐AGG ACG GCT GCC TGC TC‐3′ | 893–909 | |||
PER2 | NM_003894 | 98 | F | 5′‐TCC AGA TAC CTT TAG CCT GAT GA‐3′ | 353–375 |
P | 5′‐CCA TCT ACA AGT GGC TGC‐3′ | 396–413 | |||
R | 5′‐TTT GTG TGT GTC CAC TTT CGA‐3′ | 429–449 | |||
PER3 | NM_016831 | 94 | F | 5′‐ACA AAC AGA ACC ACA AGG CA‐3′ | 1893–1912 |
P | 5′‐CTT ACA AGC TGG TTT GC‐3′ | 1927–1943 | |||
R | 5′‐CGT CCA TTT GTT GGC ATT T‐3′ | 1986–1968 | |||
CRY1 | NM_004075 | 91 | F | 5′‐AGA ACA GAT CCC AAT GGA GAC T‐3′ | 1847–1868 |
P | 5′‐TAT CAG GCG TTA TTT GCC TGT‐3′ | 1830–1830 | |||
R | 5′‐GTG CAT TCC AGG GAT CAT AGA‐3′ | 1917–1937 | |||
CRY2 | XM_051030 | 86 | F | 5′‐CCT CCT CAG TCG GGA TCA A‐3′ | 231–249 |
P | 5′‐CGA TGG AGG TTC CTA C‐3′ | 251–266 | |||
R | 5′‐GCG GGA GTT CAG TTT CCT TA‐3′ | 297–316 | |||
CLOCK | AF011568 | 107 | F | 5′‐CAA CGC ACA CAT AGG CCA T‐3′ | 1069–1087 |
P | 5′‐CAG GTT AGC TAC ACC TCA G‐3′ | 1122–1140 | |||
R | 5′‐TTG GGT TCT TCA ACA GTG CA‐3′ | 1156–1175 | |||
BMAL1 | D89722 | 97 | F | 5′‐CAT GCA ACG CAA TGT CCA G‐3′ | 318–336 |
P | 5′‐CTG TGC TAA GGA TGG CT‐3′ | 354–370 | |||
R | 5′‐GTG TAT GGA TTG GTG GCA CCT‐3′ | 394–414 | |||
CKI∈ | NM_152221 | 110 | F | 5′‐AGG TCC TCT GCA AAG GCT ATC C‐3′ | 945–966 |
P | 5′‐CGA ATT CTC AAC ATA CCT CAA‐3′ | 970–990 | |||
R | 5′‐GCG GAA GAG CTG ACG TAG GTA A‐3′ | 1033–1054 | |||
TIM | NM_003920 | 97 | F | 5′‐CAG CAC CAC CAG GAC AAG C‐3′ | 353–371 |
P | 5′‐CTG ATG GTG AAC TTG ACA C‐3′ | 395–413 | |||
R | 5′‐GCA GAT TGC CAA AAC AGA GCA‐3′ | 423–443 |
F, forward; P, probe; R, reverse.