Table 2.
Comparison of CryoSegNet with the template-based picking, Deep Picker, crYOLO, topaz, CASSPER and CryoTransformer in terms of the resolution of 3D density maps on CryoPPP test dataset. Bold font denotes the highest resolution
| EMPIAR ID | Number of Particles | Average Resolution (Å) | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Template-based | Deep Picker | CrYOLO | Topaz | CASSPER | CryoTransformer | CryoSegNet | Template-based | Deep Picker | CrYOLO | Topaz | CASSPER | CryoTransformer | CryoSegNet | |
| 10028 | 32,183 | 30,242 | 31,699 | 35,514 | 15,637 | 40,488 | 45,218 | 4.12 | 4.09 | 4.11 | 3.97 | 4.43 | 3.86 | 2.72 |
| 10081 | 41,569 | 28,209 | 36,821 | 37,808 | 27,299 | 88,632 | 44,819 | 5.26 | 6.05 | 5.38 | 5.10 | 5.79 | 5.47 | 4.18 |
| 10345 | 14,353 | 2,470 | 11,369 | 21,343 | 9,876 | 105,739 | 15,209 | 4.07 | 9.13 | 3.94 | 3.66 | 5.14 | 6.43 | 2.89 |
| 11056 | 53,190 | 17,124 | 43,599 | 66,651 | 34,860 | 98,193 | 53,073 | 8.12 | 9.65 | 8.54 | 8.06 | 8.47 | 7.42 | 7.17 |
| 10532 | 43,662 | 28,711 | 29,434 | 38,372 | 29,290 | 148,345 | 30,155 | 3.93 | 4.92 | 4.10 | 4.27 | 3.96 | 3.92 | 3.92 |
| 10093 | 42,986 | 2,360 | 33,183 | 61,698 | 32,383 | 151,545 | 27,745 | 5.85 | 7.50 | 6.93 | 6.15 | 7.27 | 6.86 | 7.06 |
| 10017 | 49,770 | 23,462 | 47,704 | 45,511 | 38,460 | 43,735 | 10,026 | 5.00 | 5.63 | 4.87 | 5.09 | 5.33 | 5.61 | 6.91 |
| Average | 39,673 | 18,940 | 33,401 | 43,842 | 26,829 | 96,668 | 32,321 | 5.19 | 6.71 | 5.41 | 5.19 | 5.77 | 5.65 | 4.98 |