Figure - PMC

Skip to main content

An official website of the United States government

Here's how you know

Here's how you know

Official websites use .gov
A .gov website belongs to an official government organization in the United States.

Secure .gov websites use HTTPS
A lock ( ) or https:// means you've safely connected to the .gov website. Share sensitive information only on official, secure websites.

View full-text article in PMC

. 2024 Jun 11;15:4778. doi: 10.1038/s41467-024-48916-8

Search in PMC
Search in PubMed
View in NLM Catalog
Add to search

© The Author(s) 2024

Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/.

PMC Copyright notice

Fig. 3 — A Clustering of spatial transcriptomics data, cluster annotations and spatial location of clusters visualized on flight and ground control mouse brain sections. B Marker genes for each ST cluster visualized as dotplot. C Spatial distribution of 3 genes (Wfs1 for CA1 region of hippocampus, Dkk3 for CA1 and CA3 hippocampal region and Prox1 for Dentate gyrus) in three flight (left column) and three ground control (right column) ST sections. D Significantly different pathways (p < 0.05) between flight and ground control in ST cluster 9 (Cortical neurons, bottom layers). E Visualization of number of clusters identified by single-nuclei multiomics and their proportions in each ST cluster (x-axis; 0–17). Only multiomics clusters with higher proportions (>10%) are displayed in the barplot. F Cell type proportions mapped to spatial coordinates on three ground control (top row) and three flight (bottom row) mouse brain sections (Synaptic transmission I or multiomics cluster 1; Myelination or multiomics cluster 3; Neuronal activity, Synaptic transmission III or multiomics cluster 15).