Table 3.
The detailed information of selected neoepitopes for IFN-γ ELISpots assay
| Code | Peptide | HLA-A allele | Gene | Junction type | Immunogenicity score | Rank | IncLevel difference |
|---|---|---|---|---|---|---|---|
| A02_16 | ALSAWTYFL | 02:01 | TRIML2 | A3SS | 0.30319 | 0.09 | 0.601 |
| A02_20 | ALTGGFHPV | 02:01 | UNC5B | SE | 0.21072 | 0.07 | 0.438 |
| A02_24 | ALYAGLVVA | 02:01 | UNC5B | SE | 0.11969 | 0.08 | 0.438 |
| A02_28 | AQLWEDEWEV | 02:01 | GDPD5 | SE | 0.67808 | 0.04 | 0.037 |
| A02_44 | GLPEAGWEL | 02:01 | SURF4 | A3SS | 0.41259 | 0.08 | 0.223 |
| A02_54 | GVAEIPVYI | 02:01 | POLN | SE | 0.26529 | 0.08 | 0.338 |
| A02_56 | HLYEEEIGAV | 02:01 | FBXO30 | SE | 0.47129 | 0.09 | 0.105 |
| A02_101 | QLWEDEWEV | 02:01 | GDPD5 | SE | 0.53394 | 0.01 | 0.037 |
| A02_103 | QLWEHFQSL | 02:01 | HPS1 | SE | 0.11993 | 0.01 | 0.575 |
| A02_106 | RLDGAINRV | 02:01 | PHKA2 | SE | 0.22946 | 0.03 | 0.32 |
| A03_2 | ALQFLRVTK | 03:01 | SURF4 | A3SS | 0.17564 | 0.06 | 0.223 |
| A03_3 | ALTLPGLLWK | 03:01 | POFUT2 | A3SS | 0.13326 | 0.05 | 0.53 |
| A03_13 | GVSYVVPTK | 03:01 | KIT | A3SS | 0.03496 | 0.04 | 0.596 |
| A03_15 | ILNPPFEGK | 03:01 | MAP4 | SE | 0.19044 | 0.03 | 0.481 |
| A03_32 | KTPAIPTPK | 03:01 | NACA | A5SS | 0.18121 | 0.06 | 0.395 |
| A03_42 | RITEEFLGK | 03:01 | VCAN | SE | 0.33149 | 0.05 | 0.128 |
| A03_43 | RLFFWWFTK | 03:01 | ABCC3 | SE | 0.70149 | 0.08 | 0.032 |
| A03_52 | RTPHTPGTPK | 03:01 | MAP2 | SE | 0.11413 | 0.03 | 0.347 |
| A03_59 | SLGEPLPIGK | 03:01 | NACA | A5SS | 0.21183 | 0.09 | 0.395 |