Table 1.
Comparison of Sanger sequencing and amplicon sequencing of Glesvær samples [distance* (% SNPs/site)/numbers of SNPs].
| Reference or sample | Sample source | Technology | 1 | 2 | 3 | 4 | 5 | 6 |
|---|---|---|---|---|---|---|---|---|
| 1. Glesvær (Merour et al., 2011) | CCS | Sanger | ||||||
| 2. Glesvær (Markussen et al., 2008) | CCS | Sanger | 0,0743/9 | |||||
| 3. Glesvær-Tissue-1 | Tissue | HTS amplicon | 0,0407/5 | 0,1146/14 | ||||
| 4. Glesvær-Tissue-2 | Tissue | HTS amplicon | 0,0329/4 | 0,1067/13 | 0,0083/1 | |||
| 5. Glesvær-CCS-1 | CCS | HTS amplicon | 0,0169/2 | 0,0907/11 | 0,0247/3 | 0,0169/2 | ||
| 6. Glesvær-CCS-2 | CCS | HTS amplicon | 0,0169/2 | 0,0907/11 | 0,0247/3 | 0,0169/2 | 0/0 | |
| 7. Glesvær-CCS-3 | CCS | HTS amplicon | 0,0169/2 | 0,0907/11 | 0,0247/3 | 0,0169/2 | 0,0004/0 | 0,0004/0 |
*Patristic distance was extracted from a phylogenetic tree generated in IQtree with a transversion evolutionary model.