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. 2000 Mar;74(6):2489–2501. doi: 10.1128/jvi.74.6.2489-2501.2000

FIG. 8.

FIG. 8

Mutational analysis of one of the CDP/Cut binding sites within the E6 MAR of HPV-16. CDP/Cut does not bind to a particular highly conserved sequence but rather binds to AT-rich sequences that normally include the sequence 5′-TAAT-3′ (3, 28). This behavior is confirmed by an EMSA analysis of mutations of the CDP/Cut binding site within E6-10. Alteration of the TAAT element in the 3′ part of this oligonucleotide either eliminates (V and VI) or reduces (II and III) CDP/Cut binding, while alteration of two other AT-rich stretches (I and IV) has no effect on the CDP/Cut band shift.