Table 4. Haplotype association analysis of loci on cpne5a gene.
| Hap ID | Haplotype | Number (frequency) | Chi2 | P-value | OR (95% CI) | |
| PM | NM | |||||
| NM, normally maturing individual; PM, precociously maturing individual; Chi2, Chi-square value; OR, odds ratio; CI, confidence interval. | ||||||
| Hap.Ov1 | TC | 30 (0.681) | 130 (0.955) | 15.519 | 2.09e–04 | 0.23 (0.107–0.495) |
| AT | 13 (0.295) | 6 (0.044) | 21.958 | 2.37e–05 | 8.79 (3.12–24.762) | |
| Hap.Ov2 | TT | 30 (0.652) | 128 (0.927) | 13.342 | 5.99e–04 | 0.26 (0.122–0.551) |
| AA | 16 (0.347) | 10 (0.072) | 22.25 | 1.52e–05 | 6.9 (2.865–16.613) | |
| Hap.Ov3 | CCGCAC | 25 (0.568) | 117 (0.914) | 13.208 | 6.57e–04 | 0.287 (0.144–0.574) |
| TAATTT | 19 (0.431) | 11 (0.085) | 28.901 | 7.82e–07 | 8.159 (3.509–18.972) | |
| Hap.Ov4 | CGCC | 24 (0.571) | 105 (0.889) | 7.067 | 0.013 | 0.409 (0.21–0.798) |
| TATT | 17 (0.404) | 12 (0.101) | 21.44 | 1.90e–05 | 6.215 (2.694–14.333) | |
| Hap.Ov5 | GTTC | 23 (0.547) | 120 (0.895) | 20.206 | 2.25e–05 | 0.214 (0.106–0.432) |
| ACCA | 18 (0.428) | 11 (0.082) | 25.992 | 2.79e–06 | 7.472 (3.201–17.444) | |
| Hap.Ov6 | AGGG | 26 (0.59) | 109 (0.908) | 6.417 | 0.018 | 0.422 (0.215–0.83) |
| GAAT | 18 (0.409) | 10 (0.083) | 27.976 | 1.27e–06 | 8.28 (3.475–19.724) | |
| Hap.Ov7 | AAC | 22 (0.55) | 123 (0.904) | 26.16 | 1.13e–06 | 0.171 (0.084–0.35) |
| CCT | 18 (0.45) | 12 (0.088) | 24.153 | 5.79e–06 | 6.8 (2.963–15.603) | |