Table 2. Mitochondrial DNA variants located between positions 15,542 and 16,611 detected in all Polish Konik haplotype sequences compared to the reference sequence NC_001640.
The number of horses belonging to each haplotype is included. The HTs presented by more than one dam line are underlined. All obtained HTs were deposited in the GenBank database and received accession numbers OR827103–OR827145.
| Dam line/HT | GenBank acc. no. |
HG* | |||||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| No. of horses | 15542 | 15585 | 15597 | 15598 | 15601 | 15602 | 15604 | 15615 | 15616 | 15617 | 15635 | 15650 | 15659 | 15666 | 15667 | 15672 | 15703 | 15762 | 15766 | 15769 | 15770 | 15771 | 15775 | 15776 | 15777 | 15806 | 15807 | 15810 | 15811 | 15826 | 15827 | 15868 | 15870 | 15871 | 15956 | 15974 | 15995 | 15996 | 16007 | 16022 | 16540 | 16543 | 16546 | 16551 | 16557_16558insC | 16559 | 16611 | ||||
| Ref: NC_001640 | C | G | A | T | T | C | G | A | A | T | C | A | T | G | A | G | T | G | C | T | C | C | C | T | A | C | C | A | C | A | A | T | C | C | A | C | A | T | T | T | C | T | T | G | - | C | A | ||||
| Białka | HT1 | OR827103 | E | 9 | T | . | G | . | . | T | . | . | . | . | . | G | . | A | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | T | . | G | T | . | . | . | . | . | . | . | . | . | . | . |
| Bona | HT2 | OR827104 | R | 3 | . | . | . | C | . | T | . | G | G | . | . | . | C | . | . | . | C | . | . | . | T | . | T | C | . | T | . | . | . | . | G | . | . | . | G | T | . | C | . | . | T | A | . | . | . | . | . |
| Dzina I | HT3 | OR827105 | A | 14 | . | A | . | . | C | T | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | G | . | . | . | . | . | . | . | . | . | . | . | A | C | . | . | T | . |
| Geneza | HT4 | OR827106 | E | 5 | T | . | G | . | . | T | . | . | . | . | . | G | . | A | . | . | . | . | . | . | . | T | . | . | . | . | . | . | . | . | . | . | T | . | G | T | . | . | . | . | . | . | . | . | . | . | . |
| Geneza | HT5 | OR827107 | A/B | 1 | T | . | G | . | . | T | . | . | . | . | . | G | . | A | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | G | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
| Karolka | HT6 | OR827108 | A | 10 | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | G | . | . | . | . | . | . | . | . | . | . | . | . | . | . | C | . | . |
| Karolka | HT7 | OR827109 | A | 2 | . | A | . | . | C | T | . | . | . | . | . | . | . | . | . | . | . | A | T | C | T | . | T | G | . | . | T | . | T | . | G | . | T | . | G | . | G | . | C | C | . | A | C | . | . | T | . |
| Karolka | HT8 | OR827110 | G | 2 | T | . | G | . | . | T | . | . | . | . | T | G | . | A | . | A | C | . | . | . | . | . | . | . | . | . | . | . | . | G | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
| Karolka | HT9 | OR827111 | G | 2 | T | . | G | . | . | T | . | . | . | . | T | G | . | A | . | A | C | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | T | T | . | . | . | . | . | . | . | . | . | . | . | . | . |
| Karolka | HT10 | OR827112 | A | 1 | . | A | . | . | . | T | . | . | . | . | . | . | . | . | . | . | C | . | . | . | . | . | . | . | . | . | . | . | . | G | . | . | . | . | . | . | . | . | . | . | . | A | . | . | . | . | . |
| Liliputka I | HT11 | OR827113 | B | 13 | . | A | . | . | . | . | . | . | . | . | . | G | . | A | . | . | . | . | . | . | . | . | . | . | . | . | . | G | . | G | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
| Liliputka I | HT6 | OR827108 | A | 3 | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | G | . | . | . | . | . | . | . | . | . | . | . | . | . | . | C | . | . |
| Liliputka I | HT12 | OR827114 | A/B | 3 | . | . | . | . | . | . | . | . | . | C | . | G | . | A | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | G | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
| Misia II | HT13 | OR827115 | A | 3 | . | A | . | . | . | T | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | T | . | . | . | . | T | . | . | . | G | . | T | T | . | . | . | . | . | . | . | . | . | . | . | . | . |
| Misia II | HT14 | OR827116 | R | 2 | . | . | . | C | . | T | . | G | G | . | . | . | . | . | . | . | C | . | . | . | T | . | T | . | . | T | . | . | . | . | G | . | . | T | G | T | . | C | . | . | T | A | . | . | . | . | . |
| Misia II | HT15 | OR827117 | A | 1 | . | . | . | C | . | T | . | G | G | . | . | . | . | . | . | . | C | . | . | . | . | . | . | . | . | . | . | . | . | . | G | . | . | T | . | . | . | . | . | C | T | A | . | . | . | . | . |
| Ponętna | HT16 | OR827118 | A | 4 | . | A | . | . | . | T | A | . | . | . | . | . | . | . | . | . | C | . | . | . | . | . | . | . | . | . | . | . | . | G | . | . | . | . | . | . | . | . | . | . | . | A | . | . | C | . | . |
| Ponętna | HT17 | OR827119 | A | 3 | . | A | . | . | . | T | A | . | . | . | . | . | . | . | . | . | C | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | T | . | . | . | . | . | . | . | . | A | . | . | C | . | . |
| Ponętna | HT18 | OR827120 | A | 2 | . | A | . | . | . | T | A | . | . | . | . | . | . | . | . | . | C | A | T | C | T | . | T | G | . | . | T | . | T | . | G | C | T | . | G | . | G | . | C | C | . | A | . | . | C | . | G |
| Ponętna | HT9 | OR827111 | G | 1 | T | . | G | . | . | T | . | . | . | . | T | G | . | A | . | A | C | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | T | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
| Popielica | HT19 | OR827121 | J | 11 | . | A | . | . | . | T | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | T | . | . | . | . | T | . | . | . | G | . | T | T | . | . | . | . | . | . | . | . | . | . | . | . | . |
| Tarpanka I | HT20 | OR827122 | A | 9 | . | A | . | . | . | T | A | . | . | . | . | . | . | . | . | . | C | . | . | . | . | . | . | . | . | . | . | . | . | G | . | . | . | . | . | . | . | . | . | . | . | A | . | . | . | . | . |
| Tarpanka I | HT21 | OR827123 | A | 6 | . | A | . | . | C | T | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | G | . | . | . | . | . | . | . | . | . | . | . | A | C | . | . | T | . |
| Tarpanka I | HT22 | OR827124 | A | 3 | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | G | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
| Tarpanka I | HT19 | OR827121 | J | 1 | . | A | . | . | . | T | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | T | . | . | . | . | T | . | . | . | G | . | T | T | . | . | . | . | . | . | . | . | . | . | . | . | . |
| Tarpanka I | HT23 | OR827125 | A/B | 1 | T | . | G | . | . | T | . | . | . | . | . | G | . | A | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | G | . | . | . | . | . | . | . | . | . | . | . | A | . | . | . | . | . |
| Traszka | HT24 | OR827126 | A | 26 | . | . | . | . | . | T | . | . | . | C | . | . | C | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | G | . | . | . | . | . | . | . | . | . | . | . | A | C | . | . | T | . |
| Traszka | HT25 | OR827127 | A | 9 | . | . | . | . | . | T | . | . | . | C | . | . | C | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | A | C | . | . | T | . |
| Traszka | HT26 | OR827128 | A | 3 | . | . | . | . | . | T | . | . | . | C | . | . | C | . | . | . | . | A | T | C | T | . | T | G | . | . | T | . | T | . | G | C | T | . | G | . | G | . | C | C | . | A | C | . | . | T | . |
| Traszka | HT27 | OR827129 | G | 3 | T | . | G | . | . | T | . | . | . | . | T | G | . | A | . | A | C | . | . | . | . | . | . | . | . | . | . | . | . | G | . | . | . | . | . | . | . | . | . | . | . | A | C | . | . | T | . |
| Traszka | HT28 | OR827130 | A | 2 | . | . | . | . | . | T | . | . | . | C | . | . | C | . | . | . | . | . | . | . | . | T | . | . | . | . | T | . | . | . | . | . | T | . | . | . | . | . | . | . | . | A | C | . | . | T | . |
| Traszka | HT29 | OR827131 | A | 1 | . | A | . | . | . | T | A | . | . | . | . | . | . | . | . | . | C | . | . | . | . | . | . | . | . | . | T | . | . | . | . | C | . | . | . | . | . | . | C | C | . | A | . | . | . | . | . |
| Tunguska | HT30 | OR827132 | A | 13 | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | G | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
| Tygryska | HT31 | OR827133 | A/B | 5 | . | . | . | . | . | . | . | . | . | C | . | G | . | A | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | G | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
| Tygryska | HT32 | OR827134 | A | 1 | . | A | . | . | . | T | A | . | . | . | . | . | . | . | . | . | C | A | T | . | T | . | T | . | . | . | T | . | T | . | G | . | T | . | G | . | G | . | . | . | . | A | . | . | . | . | . |
| Tygryska | HT33 | OR827135 | A | 1 | . | A | . | . | . | T | A | . | . | . | . | . | . | . | . | . | C | A | T | C | T | . | T | G | . | . | T | . | T | . | G | C | T | . | G | . | G | . | C | C | . | A | . | . | . | . | . |
| Urszulka | HT34 | OR827136 | A/B | 10 | T | . | G | . | . | T | . | . | . | . | . | G | . | A | . | A | C | . | . | . | . | . | . | . | . | . | . | . | . | G | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
| Urszulka | HT35 | OR827137 | G | 9 | T | . | G | . | . | T | . | . | . | . | T | G | . | A | . | A | C | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | T | T | . | . | . | . | . | . | . | . | . | . | . | . | . |
| Urszulka | HT36 | OR827138 | A | 2 | . | . | G | . | . | T | . | . | . | . | . | G | . | A | . | A | C | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | T | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
| Urszulka | HT37 | OR827139 | A/B | 1 | . | A | . | . | . | . | . | . | . | . | . | G | . | A | . | . | . | A | T | C | T | . | T | G | . | . | . | . | T | . | G | C | T | . | . | . | G | . | C | C | . | . | . | . | . | . | . |
| Wola | HT38 | OR827140 | A | 6 | . | . | G | . | . | T | A | . | . | . | . | . | . | . | G | . | C | . | . | . | . | . | . | . | . | . | . | . | . | G | . | . | . | . | . | . | . | . | . | . | . | A | . | . | C | . | . |
| Wola | HT39 | OR827141 | A | 5 | . | . | G | . | . | T | A | . | . | . | . | . | . | . | G | . | C | A | T | C | T | . | T | G | . | . | T | . | T | . | G | C | T | . | G | . | G | . | C | C | . | A | . | . | C | . | . |
| Zaza | HT20 | OR827122 | A | 7 | . | A | . | . | . | T | A | . | . | . | . | . | . | . | . | . | C | . | . | . | . | . | . | . | . | . | . | . | . | G | . | . | . | . | . | . | . | . | . | . | . | A | . | . | . | . | . |
| Zaza | HT33 | OR827135 | A | 5 | . | A | . | . | . | T | A | . | . | . | . | . | . | . | . | . | C | A | T | C | T | . | T | G | . | . | T | . | T | . | G | C | T | . | G | . | G | . | C | C | . | A | . | . | . | . | . |
| Zaza | HT40 | OR827142 | G | 4 | T | A | G | . | . | T | . | G | . | . | T | G | . | A | . | . | C | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | T | . | . | . | . | . | . | . | . | . | . | . | C | . | . |
| Zaza | HT41 | OR827143 | A | 3 | . | A | . | . | . | T | A | . | . | . | . | . | . | . | . | . | C | A | . | C | . | . | . | G | . | . | . | . | . | . | . | C | . | . | . | . | . | . | C | C | . | A | . | . | . | . | . |
| Zaza | HT42 | OR827144 | A | 1 | . | A | . | . | . | . | . | . | . | . | . | G | . | A | . | . | . | . | . | . | . | T | . | . | G | . | . | . | T | . | . | . | . | . | G | . | . | . | . | . | . | A | . | . | . | . | . |
| Zaza | HT43 | OR827145 | A | 1 | . | A | . | . | . | T | A | . | . | . | . | . | . | . | . | . | C | . | . | . | . | T | . | . | G | . | . | . | T | . | . | . | . | . | G | . | . | . | . | . | . | A | . | A | . | . | . |
Note: