TABLE 1.
HHV-7 cDNA clones which hybridize to a HHV-6 gp105 DNA probea
| Clone | Insert size (kb) | Position (nucleotide no.)
|
Comment | |
|---|---|---|---|---|
| T3 | T7 | |||
| 1111 | 1.6 | 139006 | 137060 [poly(A)]c | gp65 (exons 2 to 8) |
| 1116 | 2.0 | 138015 | 141588b [poly(A)] | DR1 gene (Table 2) |
| 2113 | 0.9 | 137078 | 138660 | gp65 (exons 3 to 8) |
| 3115 | 0.9 | 138261 | 137057 [poly(A)] | gp65 (exons 4 to 8) |
| 4117 | 1.7 | 142655b | 136980 [poly(A)] | gp65 (intact gene) |
| 6119 | 1.4 | 141154b | 137208 [poly(A)] | gp65 (exons 2 to 8, plus novel first exon) |
a
All nucleotide positions refer to the coding DNA strand of the HHV-7JI genome (29).
b
This position maps to the DR elements at the left and right viral genomic termini; map units are provided for the location most proximal to the other elements of the cDNA (DRR). The map units for the opposite DR element (DRL) are, respectively, 2541 (clone 1116), 3608 (clone 4117), and 2107 (clone 6119).
c
Poly(A) indicates the location of the oligo(dT) tract in the cDNA clone. This corresponds to the putative 3′ end of the corresponding mRNA transcript (i.e., the 3′ poly(A) tail).