Table 1.
Quality control data statistics.
| Sample | Clean reads | Clean bases | Error rate(%) | Q20(%) | Q30(%) | GC content(%) |
|---|---|---|---|---|---|---|
| C_1 | 46957270 | 7003018540 | 0.0252 | 97.94 | 94 | 50.75 |
| C_2 | 47372722 | 7051154432 | 0.025 | 98 | 94.13 | 50.83 |
| D_1 | 50403238 | 7495431782 | 0.0252 | 97.91 | 93.92 | 50.86 |
| D_2 | 49982068 | 7437016280 | 0.0256 | 97.75 | 93.55 | 50.78 |
| H_1 | 47415256 | 7085857585 | 0.0257 | 97.74 | 93.52 | 51.23 |
| H_2 | 48176678 | 7180706951 | 0.0254 | 97.86 | 93.8 | 51.05 |
| L_1 | 55170016 | 8232221656 | 0.0253 | 97.89 | 93.88 | 50.85 |
| L_2 | 44677968 | 6661535759 | 0.0262 | 97.54 | 93.06 | 50.84 |
Clean reads: the total number of items in sequencing data after quality control; Clean bases: the total number of Clean reads multiplied by the length of reads after quality control; Error rate (%): the average Error rate of sequencing base corresponding to the quality control data; Q20 (%) and Q30 (%): the quality of sequencing data after quality control is evaluated. Q20 and Q30, respectively refer to the percentage of the total bases whose sequencing quality is above 99% and 99.9%; GC Content (%): The percentage of the sum of G and C bases corresponding to the quality control data in the total base.