Table 3.

Predicted densities $\left(\frac{\#cells}{m{m}^3}\right)$ and volumes used for their derivation. Bold values are the DL estimated densities closest to stereology.

Layer	Slab	BCFind-v2	StarDist (ResNet)	StarDist (UNet)	CellPose	Stereology	Volume ($m{m}^3$)
3	6	16 299.80	13 826.54	11 435.43	6235.90	10 646.75	84.9555
	18	14 413.17	13 245.13	9713.07	9866.65	13 412.64	113.2260
	30	13 656.05	15 475.09	14 465.01	10 517.81	11 649.91	102.6240
	42	18 052.03	18 546.95	16 531.34	9643.21	12 251.03	51.2406
	mean	15 605.26	15 273.43	13 036.21	9065.89	11 990.08
	(st. dev.)	(1709.50)	(2377.96)	(3496.18)	(1922.80)	(1156.44)
5	6	18 017.30	14 864.79	11 970.96	6380.82	12 162.03	47.1015
	18	15 780.55	13 827.55	9843.87	9875.26	17 037.78	62.9554
	30	14 428.27	16 011.94	14 808.08	10 118.20	16 708.95	56.7181
	42	20 371.37	20 665.24	18 194.80	9541.95	20 484.54	27.4817
	mean	17 149.37	16 342.38	13 704.43	8979.06	16 598.32
	(st. dev.)	(2259.02)	(3016.84)	(3485.60)	(1748.19)	(3415.10)
6	6	15 839.03	13 978.84	11 517.38	7664.54	13 890.03	58.6068
	18	13 480.22	11 848.20	8439.84	10 217.72	17 602.81	79.6373
	30	13 316.53	14 374.16	13 235.04	10 340.26	15 462.57	59.0898
	42	17 273.42	17 402.98	15 689.57	10 576.47	23 231.62	35.0406
	mean	14 977.30	14 401.05	12 220.46	9699.75	17 546.76
	(st. dev.)	(1659.38)	(2288.20)	(3074.82)	(1364.95)	(4083.97)