Table 1.
Dynamics of species in the phyla Bacteroidota, Fusobacteroidota, Spirochaetota, and Patescibacteria groups at the end of the gingivitis induction phase, according to subgingival or supragingival samples [12,14,15,16,21,22].
| Phylum | Genus | Subgingival | Supragingival | ||
|---|---|---|---|---|---|
| Increase | Decrease | Increase | Decrease | ||
| Bacteroidota | Prevotella | Prevotella shahii, Prevotella loescheii, Prevotella saccharolytica, Prevotella micans, Prevotella maculosa, Prevotella oulorum, Prevotella marshii, Prevotella nigrescens | P. loescheii, P. saccharolytica, P. micans, P. maculosa, P. oulorum, Prevotella melaninogenica, Prevotella intermedia | ||
| Porphyromonas | Porphyromonas catoniae, Porphyromonas endodontalis | P. catoniae | |||
| Tannerella | Tannerella sp. HOT_286 | Tannerella sp. HOT_286 | |||
| Alloprevotella | Alloprevotella tannerae, Alloprevotella rava | ||||
| Bergeyella | uncultured Bergeyella sp. | uncultured Bergeyella sp. | |||
| Capnocytophaga | Capnocytophaga gingivalis, Capnocytophaga leadbetteri | Capnocytophaga granulosa, Capnocytophaga sp. HOT_B29 | Capnocytophaga sputigena, C. gingivalis | ||
| Fusobacteriota | Fusobacterium | Fusobacterium nucleatum subsp. vincentii, Fusobacterium nucleatum subsp. animalis, Fusobacterium nucleatum subsp. polymorphum | F. nucleatum subsp. polymorphum | ||
| Leptotrichia | Leptotrichia buccalis, Leptotrichia sp. HOT_392 | L. buccalis, Leptotrichia sp. HOT_212, Leptotrichia sp. HOT_223, Leptotrichia sp. HOT_225, Leptotrichia sp. HOT_417, Leptotrichia hofstadii, Leptotrichia wadei, Leptotrichia shahii | |||
| Spirochaetota | Treponema | Treponema medium, Treponema socranskii, Treponema maltophilum, Treponema vincentii | T. vincentii | T. socranskii | |
| Patescibacteria group a | Gracilibacteria b | Gracilibacteria bacterium | |||
| Absconditabacteria_(SR1)_[G-1] c | Absconditabacteria_(SR1)_[G-1] sp. HOT_345 | Absconditabacteria_(SR1)_[G-1] bacterium | |||
| Saccharibacteria_(TM7)_[G-1] d | Saccharibacteria_(TM7)_[G-1] bacterium_HOT_346, Saccharibacteria_(TM7)_[G-1] bacterium_HOT_349 | Saccharibacteria_(TM7)_[G-1] bacterium_HOT_347, Saccharibacteria_(TM7)_[G-1] bacterium_HOT_348, Saccharibacteria_(TM7)_[G-1] bacterium_HOT_349 | |||
a: major bacterial phylogenetic group that includes various phyla; b: Candidatus Gracilibacteria phyl., formerly known as GN02; c: Candidatus Absconditabacteria phyl., formerly known as SR1; d: Candidatus Saccharibacteria phyl., formerly known as TM7.