Table 1.
Cell line and construct information.
| Sample No. | Cell Line or Construct 1 | Age | Genome Ancestry | Virus Genotype | Tumor Site | Histology |
|---|---|---|---|---|---|---|
| S01 | SiHa | 55 | NE Asian (Japanese) | HPV-16 | Cervix | SCCA |
| S02 | HeLa | 30 | African (American) | HPV-18 | Cervix | AdenoCA |
| S03 | CaSki | 40 | N European | HPV-16 | Cervix (met) 5 | SCCA |
| S04 | C-33A | 66 | N European | P53+, pRB+ | Cervix | SCCA |
| S05 | DoTc2 | NS | N European | HPV-16 | Cervix | NS |
| S06 | 2A3 | 56 | SE Asian (Indian) | HPV-16 4 | Hypopharynx | SCCA |
| S07 | SCC154 | 54 | Caucasian | HPV-16 4 | Tongue | SCCA |
| S08 | 3B2.1-7 | 8 | African (American) | HBV-A2 4 | Liver | HCCA |
| S09 | SNU-182 | 24 | NE Asian (Korean) | HBV-C 4 | Liver | HCCA |
| S10 | Syn HIV-1 2 | NA | NA | HIV-1 M 4 | NA | NA |
| S11 | ACH-2 3 | 3 | Caucasian | HIV-1 M 4 | Blood | T-cell |
AdenoCA, adenocarcinoma; HCCA, hepatocellular carcinoma; met, metastasis; NA, not applicable; N, northern; NE, northeastern; NS, not specified; SE, southeastern; and SCCA, squamous cell carcinoma. 1 Cell lines (S01–S09) were acquired from ATCC for sequencing [23]. The demographic, virus, and tumor information for samples (S01–S09 and S11) were gleaned from ATCC and Cellosaurus [23,24]. 2 Syn HIV-1 is a quantitative synthetic construct of HIV-1 RNA which contains fragments of the 5′ LTR, gag, pot, tat, rev, and nef genes acquired from ATCC [23]. 3 ACH-2 is an HIV-1 latently infected cell line [25]. 4 Viral genotypes or groups in italic font were determined by this study. 5 Cell line established from a cervical SCCA metastasis on the small bowel mesentery [23].