Table 2.
Comparison of plastome features in Dipodium.
| Sample | Plastome length (bp) | SSC length (bp) | IRA/B length (bp) | LSC length (bp) | GC content | Total CDS (unique CDS) | Total tRNA (unique tRNA) | Total rRNA (unique rRNA) | Total pseudogenes | Total lost genes | Total functional genes |
|---|---|---|---|---|---|---|---|---|---|---|---|
| D. pandanum 1 | 146,204 | 13,849 | 24,762 | 82,831 | 37.0% | 74 (68) | 38 (30) | 8 (4) | 9 | 3 | 120 |
| D. ensifolium | 150,084 | 16,756 | 25,497 | 82,334 | 36.9% | 74 (68) | 38 (30) | 8 (4) | 10 | 3 | 120 |
| Dipodium hamiltonianum complex | |||||||||||
| D. hamiltonianum | 145,902 | 14,384 | 24,929 | 81,660 | 37.1% | 74 (68) | 39 (31) | 8 (4) | 10 | 3 | 121 |
| D. interaneum | 146,497 | 14,635 | 24,951 | 81,960 | 37.0% | 74 (68) | 39 (31) | 8 (4) | 10 | 3 | 121 |
| Dipodium stenocheilum complex | |||||||||||
| D. elegantulum | 144,865 | 14,003 | 24,606 | 81,650 | 36.9% | 74 (68) | 39 (31) | 8 (4) | 9 | 4 | 121 |
| D. stenocheilum 2 | 145,589 | 13,821 | 25,127 | 81,514 | 37.0% | 74 (68) | 39 (31) | 8 (4) | 9 | 4 | 121 |
| D. stenocheilum 1 | 144,751 | 12,670 | 25,009 | 82,063 | 36.9% | 74 (68) | 38 (30) | 8 (4) | 9 | 4 | 120 |
| D. basalticum | 148,478 | 15,238 | 25,640 | 81,960 | 37.0% | 74 (68) | 38 (30) | 8 (4) | 10 | 3 | 120 |
| D. ammolithum | 147,842 | 14,697 | 25,600 | 81,946 | 37.0% | 74 (68) | 39 (31) | 8 (4) | 9 | 4 | 121 |
| D. variegatum | 142,949 | 12,039 | 24,436 | 82,038 | 37.0% | 74 (68) | 38 (30) | 8 (4) | 6 | 7 | 120 |
| Dipodium punctatum complex | |||||||||||
| D. pulchellum | 151,425 | 15,735 | 26,369 | 82,952 | 36.9% | 74 (68) | 38 (30) | 8 (4) | 11 | 2 | 120 |
| D. punctatum | 151,181 | 15,737 | 26,136 | 83,172 | 37.0% | 74 (68) | 38 (30) | 8 (4) | 11 | 2 | 120 |
| D. campanulatum 1 | 146,390 | 13,602 | 25,284 | 82,220 | 36.9% | 74 (68) | 37 (29) | 8 (4) | 12 | 2 | 119 |
| D. campanulatum 2 | 149,050 | 14,266 | 25,902 | 82,980 | 37.0% | 74 (68) | 38 (30) | 8 (4) | 11 | 2 | 120 |
| Dipodium roseum complex | |||||||||||
| D. atropurpureum 2 | 149,390 | 15,509 | 25,909 | 82,063 | 36.9% | 74 (68) | 38 (30) | 8 (4) | 10 | 3 | 120 |
| D. atropurpureum 1 | 150,481 | 15,633 | 26,399 | 82,050 | 36.9% | 74 (68) | 38 (30) | 8 (4) | 9 | 4 | 120 |
| D. aff. roseum 4 | 152,282 | 16,426 | 26,630 | 82,596 | 36.9% | 73 (67) | 38 (30) | 8 (4) | 11 | 3 | 119 |
| D. aff. roseum 2 | 150,462 | 15,514 | 26,388 | 82,172 | 36.9% | 74 (68) | 38 (30) | 8 (4) | 9 | 4 | 120 |
| D. aff. roseum 3 | 152,956 | 16,571 | 26,817 | 82,751 | 36.9% | 74 (68) | 38 (30) | 8 (4) | 10 | 3 | 120 |
| D. aff. roseum 1 | 151,791 | 16,362 | 26,424 | 82,581 | 36.9% | 74 (68) | 38 (30) | 8 (4) | 10 | 3 | 120 |
| D. pardalinum 2 | 151,659 | 16,276 | 26,580 | 82,223 | 36.9% | 74 (68) | 38 (30) | 8 (4) | 10 | 3 | 120 |
| D. pardalinum 1 | 148,174 | 15,283 | 25,494 | 81,903 | 36.8% | 74 (68) | 38 (30) | 8 (4) | 9 | 4 | 120 |
| D. roseum 1 | 150,857 | 15,848 | 26,521 | 81,967 | 36.9% | 74 (68) | 38 (30) | 8 (4) | 9 | 4 | 120 |
| D. roseum 2 | 147,730 | 14,192 | 25,819 | 81,900 | 36.8% | 74 (68) | 38 (30) | 8 (4) | 9 | 4 | 120 |