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. Author manuscript; available in PMC: 2024 Jun 27.
Published in final edited form as: Methods Ecol Evol. 2022 Oct 11;13(11):2429–2442. doi: 10.1111/2041-210x.13991

FIGURE 3.

FIGURE 3

Calibration of EVICORD detected rates of identity-by-descent (IBD)-inconsistent calls in UK10K data. The expected and observed fraction of sites called IBD-inconsistent for UK10K variants, for allele counts (AC) 2–5. Each dot represents a 5-mer sequence context. Dot colours represent whether the sequence context is a CpG context (blue) or not (light green). The expected fraction was calculated from each sequence context’s polymorphism probability. The solid black line is a linear regression line for all sequence contexts, and the dotted line is the identity line.