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. Author manuscript; available in PMC: 2024 Jun 27.
Published in final edited form as: Methods Ecol Evol. 2022 Oct 11;13(11):2429–2442. doi: 10.1111/2041-210x.13991

FIGURE 4.

FIGURE 4

7-mer sequence context polymorphism probabilities for sites called identity-by-descent (IBD)-inconsistent vs. IBD-consistent for UK10K variants. Each dot represents the polymorphism probability estimated for each 7-mer sequence context using our dynamic programming algorithm. The dashed blue line represents the expected polymorphism probabilities under a model of no differences between IBD-consistent and inconsistent variants. Polymorphism probabilities were strongly rank correlated (Spearman’s correlation =0.93,p<10−100).