Table 3. Rickettsia sp. CA23RL1 sequence similarity with Rickettsia rickettsii and Rickettsia 364D in study of newly recognized SFG Rickettsia as cause of severe RMSF-like illness, northern California, USA *.
Rickettsia sp. CA23RL1 target sequence | R. rickettsii sequence similarity† | Rickettsia 364 sequence similarity‡ |
---|---|---|
16S rRNA | 99.7% | 99.6% |
gltA | 99.2% | 99.6% |
ompA | 96.8% | 97.3% |
ompB | 98.6% | 98.8% |
sca4 | 98.6% | 98.6% |
*RMSF, Rocky Mountain spotted fever; SFG, spotted fever group. †Rickettsia rickettsii strain Sheila Smith, GenBank accession no. CP000848.1. ‡Rickettsia 364D, GenBank accession no. CP003308.1.