TABLE 3.
Episome carried by cell line | Sequence between TRS and RBS in p220.2 inserts | AAV-positive colonies (integration)
|
|
---|---|---|---|
No./total | % | ||
102 | TRS- GG CTC GGC-RBS | 56/40,000 | 0.140 |
201 | TRS- -RBS | 4/90,500 | 0.004 |
202 | TRS-50n+GG CTC GGC-RBS | 2/74,700 | 0.003 |
203 | TRS-GG CTC GGC+50n-RBS | 1/69,240 | 0.001 |
In episome 102, the spacer sequence is that of AAVS1; in episome 201, the spacer is deleted; in episome 202, the spacer sequence is separated from the TRS by 50 random nucleotides (50n); and in episome 203, the spacer sequence is separated from the RBS by 50 random nucleotides. Remaining details are as described in Table 2, footnote a.