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. 2000 Jul;74(13):6213–6216. doi: 10.1128/jvi.74.13.6213-6216.2000

TABLE 3.

Deletion of the spacer sequence or alteration of the distance of the spacer from the TRS and RBS motifs abrogates episomal integrationa

Episome carried by cell line Sequence between TRS and RBS in p220.2 inserts AAV-positive colonies (integration)
No./total %
102 TRS-    GG CTC GGC-RBS 56/40,000 0.140
201 TRS-              -RBS 4/90,500 0.004
202 TRS-50n+GG CTC GGC-RBS 2/74,700 0.003
203 TRS-GG CTC GGC+50n-RBS 1/69,240 0.001
a

In episome 102, the spacer sequence is that of AAVS1; in episome 201, the spacer is deleted; in episome 202, the spacer sequence is separated from the TRS by 50 random nucleotides (50n); and in episome 203, the spacer sequence is separated from the RBS by 50 random nucleotides. Remaining details are as described in Table 2, footnote a