Figure 5:

Gene set enrichment analysis with KEGG annotations and Kolmogorov–Smirnov test for the entire n2v2r ranking on LUAD TCGA when comparing male against female PANDA regulatory networks. We present the top 30 results ranked by adjusted p-values that pass a 0.1 FDR cutoff (equivalent to −log padj = 1). Bold indicates pathways common with DeDi when performing the same analysis. The x-axis represents the normalized enrichment score, and color the −log padj value. The size of the points indicates the overlap of the leading gene sets with the pathways. Long pathway names have been trimmed.