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[Preprint]. 2024 Jun 20:2024.06.19.24309087. [Version 1] doi: 10.1101/2024.06.19.24309087

Table 3.

CDCRP miRNA anticorrelated gene targets significantly differentially expressed (DE) with expected fold change (FC) direction between pre and post chemotherapy specimens in the Longwood (LW) dataset.

miR gene DE log2(FC) DE p TARGET r TARGET p LW r LW p
miR_15b_5p SLC29A2 −1.4739 0.0065 −0.2537 0.0099 −0.4121 0.0096
miR_15b_5p DNAJC5 −1.2176 0.0550 −0.2124 0.0262 −0.2998 0.0478
miR_130b_3p FASTK −1.1203 0.0741 −0.1900 0.0418 −0.3724 0.0179
miR_105_5p BRIP1 −1.5564 0.0089 −0.1901 0.0417 −0.4909 0.0022
miR_105_5p WAC −1.1844 0.0192 −0.2615 0.0081 −0.4284 0.0072
miR_105_5p NAA50 −1.3219 0.0635 −0.2208 0.0218 −0.4156 0.0090
miR_105_5p PPIE −1.4344 0.0736 −0.2016 0.0329 −0.3372 0.0296
let_7d_5p ZFYVE16 −1.3959 0.0076 −0.1816 0.0491 −0.3560 0.0228
miR_654_5p TANK 1.8639 0.0261 −0.3266 0.0012 −0.4712 0.0032
miR_654_5p EFNA1 1.5361 0.0390 −0.4377 1.57E-05 −0.3133 0.0404
miR_654_5p PTPRD 1.0426 0.0405 −0.2364 0.0152 −0.3230 0.0357
miR_654_5p TNK2 2.9069 0.0878 −0.2890 0.0038 −0.3612 0.0211
miR_149_5p LARP4 −1.4344 0.0004 −0.2573 0.0091 −0.4783 0.0028
miR_149_5p PANX1 −1.8365 0.0006 −0.2624 0.0079 −0.4777 0.0028
miR_149_5p FLNA −1.9434 0.0134 −0.2728 0.0060 −0.6079 0.0001
miR_149_5p CHCHD3 −1.6439 0.0631 −0.2186 0.0229 −0.3452 0.0265
miR_149_5p PHACTR4 −1.4739 0.0823 −0.2207 0.0218 −0.6056 0.0001
miR_454_3p WDR47 −1.1520 0.0010 −0.2070 0.0294 −0.5642 0.0004
miR_454_3p RTKN −1.1844 0.0079 −0.2139 0.0254 −0.4173 0.0087
miR_7_5p CAMKK2 −1.3959 0.0022 −0.2738 0.0059 −0.6287 0.0001
miR_7_5p ZMAT3 −1.4344 0.0098 −0.2196 0.0224 −0.5634 0.0004
miR_7_5p WDFY3 −1.0589 0.0202 −0.2470 0.0117 −0.4016 0.0114
miR_7_5p POLH −1.1203 0.0552 −0.1820 0.0488 −0.6536 2.49E-05
miR_7_5p TNRC6B −1.0589 0.0752 −0.2007 0.0336 −0.3168 0.0386
miR_374b_5p ZNF644 −1.7859 0.0020 −0.2039 0.0314 −0.3173 0.0384
miR_374b_5p BRIP1 −1.5564 0.0089 −0.2773 0.0053 −0.4662 0.0036
miR_374b_5p LYSMD3 −1.1844 0.0875 −0.3364 0.0009 −0.5243 0.0010
miR_654_3p HEY2 4.2965 0.0190 −0.3309 0.0011 −0.3422 0.0276