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[Preprint]. 2024 Jun 20:2024.06.19.24309087. [Version 1] doi: 10.1101/2024.06.19.24309087

Table 5.

Prognostic 22-miRNA profile based predictive drug response model performance in the training, test, and osteosarcoma (OSA) cell line sets.

miRNA drug MoA target coef training FDR test cor test p OSA cor n(−) connectivity hits
514a-3p dabrafenib RAF inhibitor BRAF, LIMK1, NEK11, RAF1, SIK1 −0.511 2.25E-08 0.543 6.29E-06 NA 4
514a-3p vemurafenib RAF inhibitor BRAF, RAF1 −0.500 3.48E-08 0.405 3.41E-04 NA 3
514a-3p cobimetinib MEK inhibitor NA −0.441 1.56E-06 0.418 8.31E-05 NA 3
514a-3p binimetinib MEK inhibitor MAP2K1, MAP2K2 −0.410 2.53E-06 0.389 6.91E-06 0.353 NA
514a-3p TAK-733 MEK inhibitor MAP2K1 −0.397 4.13E-06 0.254 0.004 0.766 5
514a-3p Ro-4987655 MEK inhibitor MAP2K1 −0.397 4.13E-06 0.349 5.83E-05 0.214 1
514a-3p PD-0325901 MEK inhibitor MAP2K1 −0.352 2.25E-04 0.221 0.015 0.445 11
125b-5p CGS-15943 adenosine receptor antagonist ADORAI, ADORA2A, ADORA2B, ADORA3 0.135 3.99E-04 0.301 0.004 NA 3
125b-5p tetrandrine calcium channel blocker SLC6A3 0.105 0.002 0.255 0.003 0.468 0
125b-5p LY2874455 FGFR antagonist FGFR1, FGFR2, FGFR3, FGFR4, KDR −0.103 0.002 0.254 0.003 0.230 NA
514a-3p CNX-774 Bruton’s tyrosine kinase (BTK) inhibitor BTK −0.330 0.003 0.352 4.70E-04 NA 0
514a-3p RAF265 RAF inhibitor, VEGFR inhibitor BRAF −0.326 0.004 0.356 1.03E-04 NA NA
125b-5p fluvastatin HMGCR inhibitor HMGCR −0.097 0.005 0.178 0.038 0.053 0
125b-5p neratinib EGFR inhibitor EGFR, ERBB2, KDR 0.108 0.009 0.345 3.63E-04 0.165 8
514a-3p AS-703026 MEK inhibitor MAP2K1, MAP2K2 −0.315 0.010 0.399 1.18E-04 NA 3
125b-5p tucatinib EGFR inhibitor ERBB2 0.099 0.025 0.326 0.001 0.656 NA
514a-3p ABT-702 adenosine kinase inhibitor ADK −0.305 0.031 0.388 1.61E-04 NA 3
514a-3p PD-318088 MEK inhibitor MAP2K1 −0.273 0.039 0.345 3.59E-04 0.671 NA
514a-3p GDC-0879 RAF inhibitor BRAF −0.337 0.048 0.623 0.001 NA 10