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. 2024 Jan 19;41(3):163–186. doi: 10.1007/s10585-023-10256-0

Table 6.

Online resources available for miRNA research

Databases Functions References
miRBase Summarises all the published miRNA sequences and annotations [3]
TargetScan Predicts miRNA targets [31]
miRWalk

Predicts miRNA targets based on a machine-learning algorithm, TarPmiR

Allows searches on the interactions between genes in signalling pathways or biological processes in diseases

[172]
miRDB Predicts miRNA targets by a bioinformatic tool, MirTarget [173]
miRTarBase Stores published studies that functionally validated miRNA targets [174]
miRCancerdb Stores information on miRNA to gene/protein expression association in cancer, based on TCGA and TargetScan data [175]
MiREDiBASE Provides information on miRNA editing and modification that may affect miRNA biogenesis [176]