Table 1.

Collection of most important single-cell RNA sequencing techniques

Method	Technology	Name	Platform	Chemistry	References
scRNA-seq	Microdroplets	10× Genomics RNA	Commercial	3′ or 5′	Zheng et al. [148]
	Microdroplets	Drop-seq	Research	3′	Macosko et al. [86]
	Microdroplets	Indrop	Research	3′	Klein et al. [66]
	Nanowells	Seq-Well	Research	3′	Gierahn et al. [41]
	Nanowells	Takara Wafergen	Commercial	3′, full-length	Gierahn et al. [41]
	Nanowells	Cytoseq	Research	3′	Fan et al. [33]
	FACS	Smart-seq2	Research	Full-length	Ramsköld et al. [104]
	FACS	Sci-RNA-seq	Research	3′	Cao et al. [13]
scEpigenomics	Microdroplets	10× Genomics chromium ATAC	Commercial	Tagmentation	Satpathy et al. [108]
	FACS	ATAC tagmentation	Research	Tagmentation	Buenrostro et al. [10]
	FACS	dscATAC-seq	Research	Tagmentation	Cusanovich et al. [23]
	Microdroplets	scRBBS	Research	RBBS	Guo et al. [49]
scDNA-seq	Microdroplets	10× Genomics chromium CNV	Commercial	MDA	Andor et al. [2]
	Microdroplets	Mission Bio Tapestri	Commercial	Amplicon PCR	Lan et al. [74]
	Nanowells	Takara Wafergen	Commercial/research	Tagmentation	Laks et al. [72]
	Microdroplets	tagmentation	Research	Tagmentation	Zahn et al. [145]
	FACS	Sci-seq	Research	Tagmentation	Cusanovich et al. [23]