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. 2024 Jul 2;10:71. doi: 10.1038/s41421-024-00689-6

Table 3.

Epigenetic proteins regulating osteoblast differentiation.

Enzyme Name Function Reference
Histone methylases EZH2 Catalyzes the trimethylation of H3K27 and inhibits Runx2 and OCN expression. 392
Kmt1e/Setdb1/ESET complex Mediates H3K9 trimethylation. 394
Set1a/b-COMPASS Transits H3K4me1 to H3K4me3. 400
Histone demethylases KDM6B Removes H3K9me3 and H3K27me3 methyl group. 390,391
KDM4B Removes H3K9me3 and H3K27me3 methyl group. 390,391
Jarid/Kdm5 Converts H3K4me3 and H3K4me2 to H3K4me1. 390
Histone acetylases GCN5 Regulates acetylation of histones at residues K9 and K14. 410
KAT6A Responsible for H3K9 and H3K14 acetylation. 411
CBP/P300 Mediates H3K27 acetylation and the activation of Foxo1. 412
Histone deacetylases SIRT1 Enhances Runx2 trans-activation activity. 301
HDAC1 Negatively regulates osteoblast generation by reducing Osx and OCN gene promoters’ H3 and H4 acetyl labeling. 403
HDAC2 Expressed in bone tissue and activates Akt expression, which inhibits FoxO1 transcription and leads to RANKL-induced osteoblast generation. 403
HDAC5 Binds with MEF2C to inhibit SOST expression and reduce H3K27 acetylation levels at the SOST gene site to promote Wnt/β-catenin signaling. 408
DNA methylases Dnmt3a Inhibits osteoblast differentiation via regulating Wnt/β-catenin signaling and Runx2, Ocn activity. 422
DNA demethylases TET1/2 Converts 5mCpG to 5hmCpG. 423425
Chromatin remodeling Baf45a/ Baf45d Promote the activation of genes crucial for osteoblast maturation and mineralization 415,419,420