Table 2.
Thermocycling program for gene primers.
| Bacteria | Target gene | Primary denaturation | Secondary denaturation | Annealing | Extension | No. of cycles | Final extension |
|---|---|---|---|---|---|---|---|
| P. aeruginosa | rpoB | 94°C 3 min |
94°C 60sec |
58°C 60sec. |
72°C 2 min |
30 | 72°C 2 min |
| LasB | 94°C 5 min |
94°C 60 sec |
60 °C 1 min |
72°C 1 min |
35 | 72°C 7 min |
|
|
| |||||||
| V. parahaemolyticus | Tdh | 94°C 5 min |
94°C 1 min |
55°C 1 min |
72°C 1 min |
30 | 72°C 7 min |
| ToxR | 94°C 10 min |
94°C 1 min |
63°C 1.5 min |
72°C 1.5 min |
20 | 72°C 10 min |
|
|
| |||||||
| A. hydrophila | aerA | 94°C 5 min |
94°C 30 sec |
54°C 30 sec |
72°C 1 min |
30 | 72°C 10 min |
| Act | |||||||