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. Author manuscript; available in PMC: 2024 Jul 4.
Published in final edited form as: Nat Methods. 2023 Sep 14;20(10):1483–1492. doi: 10.1038/s41592-023-01993-x

Figure 3. Structural variant evaluations.

Figure 3.

(A) Recall, precision and F1-scores computed for various tools and sequencing technologies with Genome in a Bottle Tier1 v0.6 benchmark as reference (defined on HG002). The gray histogram shows the distribution of SV sizes in the reference set. F1-scores computed for various SV size bins. (B) Structural variation call concordance with HiFi-based assemblies for various regions of the genome. Source data is available at Supplementary Tables 67.