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. 2024 May 29;52(W1):W415–W421. doi: 10.1093/nar/gkae456

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© The Author(s) 2024. Published by Oxford University Press on behalf of Nucleic Acids Research.

This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (https://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com

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Figure 2. — Examples of multi-list analysis output. (A) An ORA-based meta-analysis of three input gene lists reports enriched pathways from the integrated analysis. (B) A multi-colored pathway map for a pathway enriched in the meta-analysis, highlighting genes from the individual input gene lists. (C) A GSEA-based multi-omics analysis reports enriched pathways from the integrated analysis of RNA, protein, and metabolite data. (D) A multi-colored pathway map visualizing input values from different data types for all leading-edge genes identified in the analysis.