| Antibodies |
|
|
|
| Bacterial and virus strains |
|
E. Coli: OP50 |
Caenorhabditis Genetics Center |
OP50 |
|
E. Coli: HT115 |
Caenorhabditis Genetics Center |
HT115 |
|
|
|
| Biological samples |
|
|
|
|
|
| Chemicals, peptides, and recombinant proteins |
| 2-Butanone, 99+%, extra pure |
Acros Organics |
Cat# 149670250 |
| Critical commercial assays |
|
|
|
| Deposited data |
| Human brain bulk RNA sequencing data |
(Wang et al., 2018) |
Synapse: syn3159438; https://www.synapse.org/#!Synapse:syn3159438
|
| Human brain single-nucleus RNA sequencing data |
(Cain et al., 2023) |
Synapse: syn16780177; https://www.synapse.org/#!Synapse:syn16780177
|
| Experimental models: Cell lines |
| Experimental models: Organisms/strains |
|
C. elegans strain LC108: vIs69 [pCFJ90(Pmyo-2::mCherry + Punc-119::sid-1)]
|
Caenorhabditis Genetics Center |
LC108 |
| Oligonucleotides |
|
|
|
| Recombinant DNA |
| Plasmid: pL4440 RNAi control |
Ahringer RNAi library |
N/A |
| Plasmid: pL4440-vha-10 RNAi |
Ahringer RNAi library |
N/A |
| Plasmid: pL4440-jnk-1 RNAi |
Ahringer RNAi library |
N/A |
| Plasmid: pL4440-aps-2 RNAi |
Ahringer RNAi library |
N/A |
| Plasmid: pL4440-zyg-9 RNAi |
Ahringer RNAi library |
N/A |
| Plasmid: pL4440-F54A3.2 RNAi |
Ahringer RNAi library |
N/A |
| Plasmid: pL4440-cmd-1 RNAi |
Ahringer RNAi library |
N/A |
| Plasmid: pL4440-apl-1 RNAi |
Ahringer RNAi library |
N/A |
| Plasmid: pL4440-Y62E10A.2 RNAi |
Ahringer RNAi library |
N/A |
| Plasmid: pL4440-ephx-1 RNAi |
Ahringer RNAi library |
N/A |
| Plasmid: pL4440-misc-1 RNAi |
Ahringer RNAi library |
N/A |
| Plasmid: pL4440-pho-5 RNAi |
Ahringer RNAi library |
N/A |
| Plasmid: pL4440-pho-14 RNAi |
Ahringer RNAi library |
N/A |
| Plasmid: pL4440-mtch-1 RNAi |
Ahringer RNAi library |
N/A |
| Plasmid: pL4440-nuo-2 RNAi |
Ahringer RNAi library |
N/A |
| Plasmid: pL4440-rpt-5 RNAi |
Ahringer RNAi library |
N/A |
| Plasmid: pL4440-amph-1 RNAi |
Ahringer RNAi library |
N/A |
| Plasmid: pL4440-unc-11 RNAi |
Ahringer RNAi library |
N/A |
| Plasmid: pL4440-rpy-1 RNAi |
Ahringer RNAi library |
N/A |
| Plasmid: pL4440-nmr-2 RNAi |
Ahringer RNAi library |
N/A |
| Plasmid: pL4440-gpb-1 RNAi |
Ahringer RNAi library |
N/A |
| Plasmid: pL4440-gtl-2 RNAi |
Ahringer RNAi library |
N/A |
| Plasmid: pL4440-lad-2 RNAi |
Ahringer RNAi library |
N/A |
| Plasmid: pL4440-T09B9.3 RNAi |
Ahringer RNAi library |
N/A |
| Plasmid: pL4440-nhr-23 RNAi |
Ahringer RNAi library |
N/A |
| Software and algorithms |
| WGCNA v1.70.3 |
(Langfelder and Horvath, 2008) |
https://horvath.genetics.ucla.edu/html/CoexpressionNetwork/Rpackages/WGCNA/
|
| R version 4.0.5 |
R Core Team |
https://www.R-project.org/
|
| Rstudio v1.4 |
R Studio |
https://rstudio.com/products/rstudio/
|
| Seurat v4.1.0 |
(Hao et al., 2021) |
https://satijalab.org/seurat/index.html/
|
| Prism 8 |
Graphpad Prism |
https://www.graphpad.com/scientific-software/prism/
|
| Other |
|
|
|