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. 2024 Jul 4;14:15454. doi: 10.1038/s41598-024-66326-0

Table 1.

Phenotypic data and Genetic findings: Reported patients with variants in TYR(NM_000372.5), MITF(NM_000248.4) and OCA2(NM_000275.3).

Proband (sex) Age (yrs) FH Grading BCVA RE BCVA LE Allele 1 GnomAD v2.1.1
(MAF General
Population)
ACMG Classification Allele 2 Reference
P1 (F) 14 1 0.22 0.3 TYR: c.1037-7 T > A;p.? 0.0008614 Pathogenic (PS3,PP3,PP5, PM2)

TYR: c.1205G > A;p.R402Q

TYR: c.575C > A;p.S192Y

(Spritz et al.,1993)
P2 (M) 8 2 0 0

TYR: c.1205G > A;p.R402Q

TYR: c.455C > G;p.P152R

n.a Likely Pathogenic (PM1,PM2,PM5)

TYR: c.1205G > A;p.R402Q

TYR: c.575C > A;p.S192Y

(Rocca et al., 2022)
P3 (M) 11 1 0.22 0.1 OCA2: c.2245-6C > A;p.? 0.0001018 VUS (PM2,PP5,BP4)

OCA2:c.1256G > A;p.R419Q

MC1R: c.451C > T;p.R151C

(Mauri et al., 2017)
P4 (M) 11 2 0.3 0.22

TYR: c.1205G > A;p.R402Q

TYR: c.739 T > C;p.C247R

n.a Pathogenic (PM1,PM2,PP3, PP5)

TYR: c.1205G > A;p.R402Q

TYR: c.575C > A;p.S192Y

(Urtatiz, Sanabria, and Lattig, 2014)
P5 (F) 9 1 0 0 MITF: c.808C > T;p.R270* n.a Pathogenic (PVS1,PP5,PM2) Wild type (Sun et al., 2016)

P6 (F)

P7 (F)

18

16

2

2

0.3

0.22

0.22

0.22

TYR: c.140G > A;p.G47D 0.0001556 Pathogenic (PM1,PM2, PM5,PP5)

TYR: c.1205G > A;p.R402Q

TYR: c.575C > A;p.S192Y

(Marti et al.,2018;Oetting et al., 1993)
P8 (F) 14 1 0.4 0.1

TYR: c.575C > A;p.S192Y

OCA2:c.1076G > A;p.G359D

0.000007964 Pathogenic (PM1,PM2, PM5,PP3,PP5)

TYR: c.575C > A;p.S192Y

OCA2:c.1065G > A;p.A355 = 

(Mauri et al., 2017)

Frequency data refer to the GnomAD v2.1.1 General Population. Polymorphisms are shown in bold: TYR: c.1205G > A (MAF: 0.1765), TYR: c.575C > A (MAF: 0.2502), OCA2:c.1256G > A (MAF: 0.04658), MC1R: c.451C > T (MAF: 0.04481), OCA2:c.1065G > A (MAF: 0.6353). The table shows frequency data and the ACMG classification for the rare variants. The results of segregation are discussed in the text. In P3 and P8 molecular results were inconclusive.