Skip to main content
. 2024 May 25;27(6):110110. doi: 10.1016/j.isci.2024.110110
REAGENT or RESOURCE SOURCE IDENTIFIER
Biological samples

Human plasma This paper N/A

Chemicals, peptides, and recombinant proteins

Acetonitrile Fisher Chemical Cat#75-05-8
Formic Acid Sigma-Aldrich Cat#64-18-6
Ammonium Bicarbonate Sigma-Aldrich Cat#1066-33-7
Dithiothreitol Sigma-Aldrich Cat#3483-12-3
Iodoacetamide Sigma-Aldrich Cat#144-48-9
Trypsin Promega Cat#9002-07-7
Acetone Sigma-Aldrich Cat#67-64-1
Ultra-pure water This paper N/A
Formic Acid Fisher Chemical Cat#64-18-6
Methanol Fisher Chemical Cat#67-56-1

Deposited data

Mass spectrometry proteomics data This paper https://proteomecentral.proteomexchange.org; ID:PXD050303
Untargeted metabolomic data This paper https://www.ebi.ac.uk/metabolights/MTBLS9664

Software and algorithms

GraphPad Prism 9.0 GraphPad Software, Inc. https://www.graphpad.com
R https://cran.r-project.org V4.3.1
Biorender Biorender https://www.biorender.com/
Proteome Discoverer Thermo Fisher Scientific (USA) RRID:SCR_014477
UniProt https://www.uniprot.org/ RRID:SCR_002380
MetaboAnalyst https://www.metaboanalyst.ca/ RRID:SCR_015539
BiocManager package https://bioconductor.org/ N/A
STRING http://string.embl.de/ RRID:SCR_005223
MS-DIAL http://prime.psc.riken.jp/compms/msdial/main.html RRID:SCR_023076
IBM SPSS Statistics https://www.ibm.com/products/spss-statistics RRID:SCR_016479
HMDB http://www.hmdb.ca RRID:SCR_007712

Other

Vortex Mixer Changzhou Enpei Instrument Manufacturing Co., Ltd NP-30S
Mini Centrifuge SCILOGEX D1008E
High-Speed Refrigerated Centrifuge SIGMA 1-15K
Analytical Balance Mettler Toledo Instruments (Shanghai) Co., Ltd AL104
Vacuum Centrifugal Concentrator Thermo Fisher Scientific (USA) SPD121P-230
Electrospray Ionization Hybrid Ion Trap-Orbitrap Mass Spectrometer Thermo Fisher Scientific (USA) Orbitrap Fusion™ Lumos™ Tribrid™ Mass Spectrometer
High-Performance Liquid Chromatograph Thermo Fisher Scientific (USA) Vanquish
High-Performance Liquid Chromatograph Thermo Fisher Scientific (USA) Ultimate 3000
Mass Spectrometer AB SCIEX™ TripleTOF5600+
Vacuum Centrifugal Concentrator Eppendorf (Germany) Concentrator plus
Analytical Balance Sartorius (Switzerland) Sartorius BP211d
Low-Temperature High-Speed Centrifuge Beckman Coulter (USA) Microfuge 22R Centrifuge
Mini Centrifuge Scilogex (USA) D1008
Vortex Mixer Scilogex (USA) MX-S