Subject	Cancer Research
Specific subject area	DNA methylation profiles of pediatric CNS, soft tissue, and bone tumor samples
Data format	Raw
Type of data	.fastq.gz files (raw sequencing data)
Data collection	DNA isolated from frozen tumor tissue samples was used for library preparation utilizing hybridization-based target enrichment and subsequent bisulfite conversion. Two different kits/panels were used, including Agilent SureSelectXT Human Methyl-Seq and Illumina TruSeq Methyl Capture EPIC Library Prep Kit. Libraries were sequenced on the Illumina NextSeq 500 device, sequencing reads were quality-checked, and raw sequencing reads were deposited to The European Genome-phenome Archive.
Data source location	Institution: Central European Institute of Technology, Masaryk University City/Town/Region: Brno Country: Czech Republic Latitude and longitude for collected samples/data: 49.17893945357473, 16.570828322685344
Data accessibility	Repository name: The European Genome-phenome Archive Data identification number: https://doi.org/10.5281/zenodo.10877204 Direct URL to data: https://ega-archive.org/studies/EGAS50000000051 Instructions for accessing these data: Please reach out to the contact person of the Data Access Committee to be granted permission to download the data.