Table 4.
Sample ID | Centre #1 | Centre #2 | Centre #3 | |
Illumina NextSeq 550Dx | Illumina HiSeq 2500 | Ion Gene Studio S5 Plus System | Illumina NextSeq 550 platform | |
SOPHiA DDM HRD solution panel | MyChoice CDx Myriad HRD | Oncomine HRR pathway panel | Amoy HRD focus panel | |
ID_1 | POS | NEG | POS* | POS |
ID_2 | POS | POS | NEG | POS |
ID_3 | POS | POS | POS | POS |
ID_4 | NEG | POS | POS | POS |
ID_5 | NEG | NEG | NEG | NEG |
ID_6 | NEG | NEG | NEG | NEG |
ID_7 | NEG | NEG | NEG | NEG |
ID_8 | NEG | NEG | NEG | NEG |
ID_9 | NEG | NEG | NEG | NEG |
ID_10 | NEG | NEG | NEG | NA |
ID_11 | POS | POS | NEG | NA |
ID_12 | NEG | NEG | NEG | NEG |
ID_13 | POS | POS | NEG | POS |
ID_14 | NEG | NEG | NEG | NEG |
ID_15 | NEG | NEG | NEG | NEG |
ID_16 | POS | POS | POS | POS |
ID_17 | NEG | NEG | NEG | POS* |
ID_18 | NEG | NEG | NEG | NA |
ID_19 | POS | POS | POS | POS |
ID_20 | NEG | NEG | NEG | NEG |
*Borderline results.
HRD, homologous recombination deficiency; HRR, homologous recombination repair; ID, identify number; NA, not assessed; NEG, negative; NGS, next-generation sequencing; POS, positive.