TABLE 2.
Position of maximum LOD score and 95% credible intervals for each trait in the Little Lake linkage map and the Crescent Pond linkage map.
| Little Lake | Crescent pond | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Trait | Sig. | LG | Position genome‐wide max LOD score | 95% CI | Trait | Sig. | LG | Position genome‐wide max LOD score | 95% CI | ||
| Cranial Height | * | 1 | 259 | (250, 270) | Suspensorium Length | 1 | 566 | (20, 730) | |||
| Premaxilla to Pelvic Girdle | 1 | 146 | (0, 350) | Nasal Tissue Protrusion | 1 | 570 | (0, 740) | ||||
| Cranium to Dorsal Fin | 2 | 303 | (160, 380) | Premaxilla to Pelvic Girdle | 1 | 568 | (310, 600) | ||||
| Lower Jaw Length | 3 | 9 | (0, 340) | Ectopterygoid | 3 | 272 | (0, 560) | ||||
| Dentigerous Arm Width | * | 3 | 9 | (0, 340) | Standard Length (mm) | 3 | 50 | (40, 500) | |||
| Caudal Peduncle Length | 3 | 168 | (0, 340) | Dentigerous Arm Width | 4 | 317 | (40, 510) | ||||
| Dorsal Find width | 4 | 187 | (10, 310) | Cranium to Dorsal Fin | 4 | 89 | (30, 510) | ||||
| Anal Fin Width | 4 | 14 | (0, 280) | Lower Jaw Length | 5 | 136 | (0, 470) | ||||
| Dentigerous Arm Depth | * | 6 | 79 | (20, 90) | Caudal Peduncle height | 5 | 381 | (0, 470) | |||
| Anterior Body Depth | 6 | 289 | (0, 300) | Jaw Closing In‐Lever | 6 | 380 | (150, 410) | ||||
| Orbit Diameter | 8 | 266 | (0, 290) | Maxilla Length | 6 | 468 | (0, 480) | ||||
| Head Depth | 8 | 206 | (0, 290) | Dentigerous Arm Base | 6 | 107 | (0, 480) | ||||
| Jaw Closing In‐Lever | * | 9 | 54 | (40, 90) | Ascending Process Length | 6 | 106 | (0, 470) | |||
| Anal Fin Height | 9 | 100 | (70, 240) | Pelvic Girdle Length | 8 | 370 | (20, 435) | ||||
| Maxillary Head Protrusion | * | 10 | 35 | (0, 260) | Dorsal Fin Height | 8 | 91 | (0, 380) | |||
| Ascending Process Length | 12 | 119 | (90, 150) | Caudal Peduncle Length | 8 | 258 | (30, 425) | ||||
| Standard Length (mm) | 12 | 200 | (50, 210) | Anal Fin Width | 8 | 190 | (110, 400) | ||||
| Ectopterygoid | 13 | 170 | (150, 180) | Maxillary Head Protrusion | 9 | 300 | (0, 350) | ||||
| Nasal Tissue Protrusion | 13 | 193 | (20, 200) | Proportion Time Spent Near Scale‐Eater Males | 9 | 166 | (50, 340) | ||||
| Palatine Height | 14 | 147 | (110, 210) | Cranial Height | * | 10 | 204 | (130, 340) | |||
| Suspensorium Length | 14 | 153 | (70, 180) | Posterior Body Depth | 10 | 270 | (0, 330) | ||||
| Jaw Opening In‐Lever | 16 | 58 | (40, 140) | Palatine Height | 11 | 70 | (0, 310) | ||||
| Dorsal Fin Height | 16 | 52 | (40, 60) | Head Depth | 12 | 111 | (100, 280) | ||||
| Pelvic Girdle Length | 17 | 50 | (10, 160) | Opening In‐Lever | 13 | 10 | (0, 90) | ||||
| Maxillary Head Height | 18 | 122 | (30, 160) | Dentigerous Arm Depth | * | 13 | 2 | (0, 250) | |||
| Caudal Peduncle Height | 19 | 44 | (20, 90) | Maxillary Head Height | 13 | 170 | (0, 280) | ||||
| Dentigerous Arm Base | 21 | 74 | (0, 100) | Adductor Mandibulae Mass | * | 13 | 2 | (0, 70) | |||
| Maxilla Length | 22 | 40 | (20, 50) | Dorsal Fin Width | 14 | 305 | (30, 330) | ||||
| Posterior Body Depth | 24 | 30 | (10, 30) | Anal Fin Width | 14 | 330 | (280, 330) | ||||
| Orbit Diameter | 16 | 107 | (0, 190) | ||||||||
| Anterior Body Depth | 16 | 170 | (10, 220) | ||||||||
Note: Colors represent corresponding linkage groups across lakes. Asterisks represent traits that were marginally significant at the p < .1 level in the genome scan.