Extended Data Fig. 3 |. Measured and Raman-predicted single cell profiles co-embed well as reflected by gene scores for each cell type.

UMAP co-embedding of Raman predicted RNA profiles and measured scRNA-seq profiles (dots) colored by scores of marker gene for different cell types (rows) determined by smFISH measurements (left, for cells with Raman-predicted profiles) or real scRNA-seq measurements (right, for cells with scRNA-seq profiles).