REAGENT or RESOURCE | SOURCE | IDENTIFIER |
---|---|---|
Antibodies | ||
Anti-KIF22 antibody | GeneTex | Cat#GTX66353; RRID:AB_2943604 |
Anti-Ki67 antibody | Abcam | Cat#ab15580; RRID:AB_443209 |
Anti-cleaved caspase3 antibody | Cell signaling technologies | Cat#9664; RRID:AB_2070042 |
Anti-α-tubulin antibody | Fujifilm Wako | Cat#017–25031; RRID:AB_2943605 |
Anti-Myc-tag antibody | MEDICAL & BIOLOGICAL LABORATORIES CO., LTD. | Cat#M192-3; RRID:AB_11160947 |
Anti-GAPDH, HRP conjugate | MEDICAL & BIOLOGICAL LABORATORIES CO., LTD. | Cat#M171-7; RRID:AB_10699462 |
Anti-Mouse, HRP conjugate | Jackson ImmunoResearch Laboratories | Cat#115-035-062; RRID:AB_2338504 |
Anti-Rabbit, HRP conjugate | Jackson ImmunoResearch Laboratories | Cat#111-035-045; RRID:AB_2337938 |
Alexa Fluor 546-conjugated anti-rabbit IgG | Thermo Fisher Scientific | Cat#A-11035; RRID:AB_2534093 |
Alexa Fluor 488-conjugated anti-rabbit IgG | Thermo Fisher Scientific | Cat#A-32731; RRID:AB_2633280 |
Alexa Fluor 555-conjugated anti-mouse IgG | Thermo Fisher Scientific | Cat#A-32727; RRID:AB_2633276 |
Alexa Fluor 488-conjugated anti-mouse IgG | Thermo Fisher Scientific | Cat#A-32723; RRID:AB_2633275 |
Bacterial and virus strains | ||
5-alpha Competent E. coli | New England Biolabs | Cat#C2987H |
Chemicals, peptides, and recombinant proteins | ||
Alcian blue 8GX | Merck | Cat#A5268-10G |
Alizarin Red S | Fujifilm wako | Cat#011-01192 |
Methyl-methacrylate and 2-hydroxyethyl methacrylate mixture | Fujifilm wako | Cat#086-04385 |
Dulbecco’s Modified Eagle Medium (DMEM)/Ham’s F12 | Fujifilm Wako | Cat#048-29785 |
Streptomycin | Fujifilm Wako | Cat#168-23191 |
Insulin-Transferrin-Selenium (ITS) solution | Thermo Fisher Scientific | Cat#41400045 |
DMEM | Fujifilm Wako | Cat#043-30085 |
Collagenase | Fujifilm Wako | Cat#034-22363 |
TRIzol™ Reagent | Thermo Fisher Scientific | Cat#15596026 |
Power Up SYBR™ Green Master Mix | Thermo Fisher Scientific | Cat#A25742 |
ProLong™ Glass Antifade Mountant | Thermo Fisher Scientific | Cat#P36984 |
4′,6-diamidino-2-phenylindole, dihydrochloride (DAPI) | Dojindo | Cat#D212 |
Protease Inhibitor Cocktail SetⅠ | Fujifilm Wako | Cat#165-26021 |
PhosSTOP™ | Merck | Cat#4906845001 |
Immobilon ECL Ultra Western HRP Substrate | Merck | Cat#WBULS0100 |
Nocodazol | Selleck Biotech | Cat#S2775 |
Critical commercial assays | ||
PrimeSTAR Max | Takara Bio | Cat#R045A |
PrimeSTAR Mutagenesis Basal Kit | Takara Bio | Cat#R046A |
Fast Gene™ RNA Basic Kit | Nippon Gene | Cat#FG-80050 |
High-Capacity cDNA Reverse Transcription Kit | Thermo Fisher Scientific | Cat#4368814 |
Cell Counting Kit-8 (CCK8) | Dojindo | Cat#CK04 |
MEBSTAIN Apoptosis TUNEL Kit Direct | MBL | Cat#8445 |
Dual-Glo Luciferase Assay System | Promega | Cat#E2920 |
Nano-Glo Dual-Luciferase Reporter Assay System | Promega | Cat#N1610 |
Experimental models: Cell lines | ||
ATDC5 cells | Riken Bio Resource Center Cell Bank | Cat#RCB0565; RRID:CVCL_3894 |
HEK293 cells | Riken Bio Resource Center Cell Bank | Cat#RCB1637; RRID:CVCL_0045 |
Experimental models: Organisms/strains | ||
C57BL/6N | CLEA Japan | N/A |
Kif22ΔC/C57BL/6N | This paper | N/A |
Oligonucleotides | ||
Primer: Kif22 Forward: GGCCGCTGTGTAAGCAAAG | This paper | N/A |
Primer: Kif22 Reverse: TCCTTCGCTTCTGTCTCTCCA | This paper | N/A |
Primer: Col2a1 Forward: GCTGGTGAAGAAGGCAAACGAG | Nakatomi et al.37 | https://doi.org/10.1016/j.bone.2019.01.002 |
Primer: Col2a1 Reverse: CCATCTTGACCTGGGAATCCAC | Nakatomi et al.37 | https://doi.org/10.1016/j.bone.2019.01.002 |
Primer: Acan Forward: CAGCTGCCCTTCACATGTAAA | Nakatomi et al.37 | https://doi.org/10.1016/j.bone.2019.01.002 |
Primer: Acan Reverse: TGGACAAAGCCCTCAGTACACT | Nakatomi et al.37 | https://doi.org/10.1016/j.bone.2019.01.002 |
Primer: Tbp Forward: GAAGCTGCGGTACAATTCCAG | Goto et al.38 | https://doi.org/10.1177/00220345221075966 |
Primer: Tbp Reverse: CCCCTTGTACCCTTCACCAAT | Goto et al.38 | https://doi.org/10.1177/00220345221075966 |
Primer: qPCR Kif22 wt check Forward: aacctggagtgattcctcggg | This paper | N/A |
Primer: qPCR Kif22 ΔC check Forward: aacctggagtgattcctcAgC | This paper | N/A |
Primer: qPCR Kif22 check Reverse: atgcaggatccaagaggtctaatac | This paper | N/A |
Recombinant DNA | ||
pBAsi-mU6 vector | Takara Bio | Cat#3222 |
Cosmid vector pAxcwit2 | Takara Bio | Cat#6174 |
pcDNA3.1 | Thermo Fisher Scientific | Cat#V79020 |
Cosmid vector pAxEFwtit2 | Takara Bio | Cat#6174 |
pTagRFP-tubulin | Evrogen | Cat#FP145 |
pGL4.74[hRluc TK] | Promega | Cat#E6921 |
pBiT1.1-C [TK/LgBiT] Vector | Promega | Cat#N196A |
pBiT2.1-C [TK/SmBiT] Vector | Promega | Cat#N197A |
pGL4.53[luc2/PGK] Vector | Promega | Cat#E501A |
Col2a1-luc | Hata et al.39,40 | |
Software and algorithms | ||
ImageJ | Schneider et al.41 | https://imagej.nih.gov/ij/ |