Table 1.
Tract | ROIs | Reference |
---|---|---|
ON | Optic nerve head (manually placed sphere) and optic chiasm (FreeSurfer segmentation114 on structural image). | Miller et al.,2019108; Takemura et al., 2023105 |
OT | Optic chiasm (FreeSurfer segmentation on structural image) and LGN (manually placed sphere on structural image with a guide of deterministic tractography from the optic chiasm). | Ogawa et al., 2014118; Takemura et al., 2019119; Ogawa et al., 2022130 |
Optic chiasm (nonlinear warping from the optic chiasm identified from 5 subjects) and LGN (automated identification from tractography and shape analysis). | Kammen et al., 2016120 | |
OR | LGN (manually placed sphere with a guide of deterministic tractography from the optic chiasm) and V1 (manually drawn calcarine sulcus). | Sherbondy et al., 2008117 |
LGN (manually drawn based on structural image with a guide of deterministic tractography from the optic chiasm) and V1 (FreeSurfer segmentation on structural image). | Ogawa et al., 2014118; Takemura et al., 2019119; Ogawa et al., 2022130 | |
Manually placed NOT ROIs around the medial, anterior, and lateral Mayer’s loop. | Chamberland et al., 2017154 | |
LGN (automated identification from tractography and shape analysis) and V1 (Benson atlas).174,175 | Kammen et al., 2016120 | |
Thalamus and V1 (FreeSurfer segmentation on structural image) combined with qT1. | Schurr et al., 2018157 | |
Thalamus and visual cortex endpoint ROIs and axial waypoint ROIs transformed from the MNI template. | Caffarra et al., 2021182 | |
LGN (FreeSurfer-based segmentation) and V1 (Benson atlas).174,175 | Lerma-Usabiaga et al., 2023123 | |
Forceps Major | Splenium and occipital lobe white matter. | Dougherty et al., 2005193 |
Coronal waypoint ROIs in each hemisphere’s occipital cortex transformed from the MNI space. | Yeatman et al., 201257 | |
Splenium the entire coronal section posterior to the splenium | Scherf et al., 2014195 | |
VOF | Ventral occipitotemporal cortex (FreeSurfer segmentation). In addition, streamlines intermingle with the arcuate fasciculus identified by using the AFQ57 is removed. | Yeatman et al., 2014160 |
Waypoint ROIs in the dorsal and lateral part of the occipital white matter. | Takemura et al., 2016207 | |
ROIs used in Yeatman et al., 2014160 and Takemura et al., 2016207 combined with qT1. | Schurr et al., 2019217 |
LGN, lateral geniculate nucleus; ON, optic nerve; OR, optic radiation; OT, optic tract; qT1, quantitative T1; VOF, vertical occipital fasciculus; V1, primary visual cortex.