Figure 3.

The denoising performance of RENDOR on GRNs that inferred from the DREAM5 dataset. (a) and (b) illustrate the denoising performance of RENDOR on ten GRNs (x-axis) for varying values of RENDOR’s parameter $m$ (y-axis). The heatmap colors represent the degree of improvement in scores after denoising compared to before denoising. The symbol “+” indicates an enhancement in network accuracy after denoising, whereas “-” denotes a reduction. (c) and (d) present the AUPR and AUROC scores for the ten GRNs before denoising (raw) and after denoising using the five methods. The parameter $m$ of RENDOR was set to 4. (e) Boxplot showing the improvement of AURPC and AUPR scores (y-axis) of GRNs derived from various denoising methods (x-axis), as compared to the original GRNs. Each dot corresponds to a GRN.