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. 2024 Apr 30;13(6):e01020-23. doi: 10.1128/mra.01020-23

TABLE 1.

Summary of genome assembly and genotypic characteristics of two E. coli isolates

Label Source Serotype STa Size (bp) Avg. per-base coverage (×) GC content (%) Nanopore N50 CDSs (with protein) GenBank accession no.
Nanopore Illumina
APEC-O2-MS1266b Liver O2/O50:H5 355 4,735,863 300 304 51 8,936 4,571 CP135959
pAPEC-O2-MS1266-1c 134,102 124 139 49 CP135960
pAPEC-O2-MS1266-2c 122,100 145 217 54 CP135961
pAPEC-O2-MS1266-3c 1,552 6 8,066 52 CP135962
APEC-O2-MS1657b Heart O2/O50:H1 429 5,059,841 144 319 51 8,866 4,883 CP135957
pAPEC-O2-MS1657-1c 191,500 176 389 50 CP135958
a

ST: sequencing type.

b

Chromosome.

c

Plasmid.