TABLE 1.
Label | Source | Serotype | STa | Size (bp) | Avg. per-base coverage (×) | GC content (%) | Nanopore N50 | CDSs (with protein) | GenBank accession no. | |
---|---|---|---|---|---|---|---|---|---|---|
Nanopore | Illumina | |||||||||
APEC-O2-MS1266b | Liver | O2/O50:H5 | 355 | 4,735,863 | 300 | 304 | 51 | 8,936 | 4,571 | CP135959 |
pAPEC-O2-MS1266-1c | 134,102 | 124 | 139 | 49 | CP135960 | |||||
pAPEC-O2-MS1266-2c | 122,100 | 145 | 217 | 54 | CP135961 | |||||
pAPEC-O2-MS1266-3c | 1,552 | 6 | 8,066 | 52 | CP135962 | |||||
APEC-O2-MS1657b | Heart | O2/O50:H1 | 429 | 5,059,841 | 144 | 319 | 51 | 8,866 | 4,883 | CP135957 |
pAPEC-O2-MS1657-1c | 191,500 | 176 | 389 | 50 | CP135958 |
ST: sequencing type.
Chromosome.
Plasmid.