TABLE 3.
Allelic distances between isolates of lineage 4 found in members of the same family, for 50 families with 2 isolates and 2 families with 3 isolates, using 1,727-genes cgMLST, over the period 2017–2021c
| Code of the isolates | Time interval (days) | Allelic distance |
|---|---|---|
| A1-A2a | 0 | 3 |
| A3-A4a | 0 | 4 |
| A5-A6a,b | 0 | 1 |
| A7-A8a | 0 | 2 |
| A9-A10a | 0 | 2 |
| A11-A12 | 0 | 1 |
| A13-A14 | 0 | 2 |
| A15-A16 | 0 | 3 |
| A17-A18 | 0 | 3 |
| A19-A20 | 0 | 3 |
| A21-A22 | 0 | 4 |
| A23-A24 | 0 | 4 |
| A25-A26 | 0 | 2 |
| A27-A28b | 0 | 2 |
| A29-A30 | 0 | 22 |
| A31-A32 | 0 | 60 |
| A33-A34 | 0 | 78 |
| A35-A36 | 0 | 68 |
| A37-A38a | 1 | 1 |
| A39-A40a | 1 | 3 |
| A41-A42a | 1 | 2 |
| A43-A44a | 1 | 5 |
| A45-A46 | 1 | 4 |
| A47-A48 | 1 | 4 |
| A49-A50 | 1 | 2 |
| A27-A52b | 1 | 3 |
| A52-A28b | 1 | 4 |
| A55-A56 | 2 | 1 |
| A57-A58 | 2 | 3 |
| A59-A60 | 2 | 2 |
| A61-A62 | 3 | 2 |
| A63-A64 | 3 | 3 |
| A65-A66 | 4 | 4 |
| A67-A68a | 5 | 3 |
| A69-A70 | 5 | 3 |
| A71-A72 | 5 | 4 |
| A73-A74 | 6 | 3 |
| A75-A76 | 6 | 0 |
| A77-A78a | 8 | 5 |
| A79-A80a | 8 | 4 |
| A81-A82 | 9 | 4 |
| A83-A84 | 9 | 5 |
| A85-A5a,b | 11 | 3 |
| A85-A6a,b | 11 | 3 |
| A89-A90 | 11 | 4 |
| A91-A92 | 11 | 2 |
| A93-A94a | 12 | 5 |
| A95-A96a | 12 | 1 |
| A97-A98 | 12 | 3 |
| A99-A100a | 14 | 1 |
| A101-A102 | 15 | 1 |
| A103-A104a | 17 | 1 |
| A105-A106 | 18 | 4 |
| A107-A108a | 19 | 4 |
| A109-A110 | 31 | 4 |
| A111-A112 | 51 | 68 |
a
Both isolates recovered in 2017 or 2018.
b
Isolates recovered in families with 3 isolates.
c
The time interval is the number of days between the isolation of the two strains compared two-by-two.