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. 2024 Jul 11;2024:baae051. doi: 10.1093/database/baae051

Table 1.

Comparison of DrugRepoBank with other 12 drug repositioning databases

Data amount and features DrugRepoBank PharmOmics DREIMT DrugSimDB NeDRex LINCS Data Portal 2.0 Promiscuous 2.0 EK-DRD RepurposeDB repoDB DrugSig Promiscuous Connectivity map
Database Drugs 49 652 941 0 10 317 13 300 21 231 991 805 1963 253 1571 1300+ 25 000 5000
Targets 4221 18 710 70 0 212 745 0 9430 2985 305 0 800 6500 0
Drug–target interactions 880 945 0 0 20 061 29 932 0 2 727 520 30 944 0 0 0 21 500 0
Drug–disease interactions 28 978 0 0 0 0 0 0 0 0 6677 0 0 0
Drug signature 473 647 14 366 4694 0 36 025 570 862 0 0 0 0 6000 0 1 500 000
Disease signature 25 0 2687 0 24 120 0 0 0 0 0 0 0 0
Pathway 6700 0 0 3888 2309 0 0 1332 0 0 0 1600 0
Side effect 109 698 0 0 139 756 0 0 4964 0 0 0 0 1100 0
Disease 3379 0 0 10 562 0 0 3379 856 1125 2051 0 0 0
Predicted targets Yes 0 0 0 0 0 Yes 0 0 0 0 0 0
Literature Yes No No No No No No Yes No No No No No
Network Network visualization Interactive Interactive None Interactive Interactive None Interactive Static Static None None Interactive None
Annotation Functional enrichment analysis Yes Yes Yes No Yes Yes No No Yes No No No No
Prediction algorithms Similarity- based algorithm Yes No No Yes No No Yes Yes No No No Yes No
Artificial-intelligence- based algorithm Yes No No No No No Yes No No No No No No
Signature- based algorithm Yes Yes Yes No No Yes No No No No Yes No Yes
Network- based algorithm Yes Yes No No Yes No No No No No No Yes No
Publications Year 2022 2021 2021 2021 2020 2020 2019 2018 2017 2017 2010 2006
Publish journal iScience Bioinformatics Briefing in Bioinformatics Nature Commun-ications Nucleic Acids Research Nucleic Acids Research Journal of Chemical Information and Modeling Briefings in Bioinformatics Scientific data PLoS One Nucleic acids Research Science
Number of citations (Accessed Google Scholar on 1 September 2023) 5 9 9 28 103 17 5 78 171 47 244 4848
Web interface Link https://awi.cuhk.edu.cn/DrugRepoBank http://mergeomics.research.idre.ucla.edu http://www.dreimt.org/ http://vafaeelab.com/drugSimDB.html https://api.nedrex.net https://lincsportal.ccs.miami.edu/signatures/home http://bioinformatics.charite.de/promiscuous2 https://www.idruglab.com/drd/index.php http://repurposedb.dudleylab.org/ http://apps.chiragjpgroup.org/repoDB/ http://biotechlab.fudan.edu.cn/database/drugsig/ http://bioinformatics.charite.de/promiscuous https://portals.broadinstitute.org/cmap
Accessibility Yes Yes Yes Yes Yes Yes Yes No Yes Yes No Yes Yes
Reference (17) (16) (15) (14) (13) (12) (11) (10) (9) (8) (7) (6)