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. 2024 Jun 25;41(7):msae131. doi: 10.1093/molbev/msae131

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© The Author(s) 2024. Published by Oxford University Press on behalf of Society for Molecular Biology and Evolution.

This is an Open Access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.

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Fig. 2. — Contrasting phylogenetic relationships of three fungal clades. a) The ML phylogeny of fungi inferred from a concatenated supermatrix of 1,233 nuclear genes (609,899 amino acid sites) by Shen et al. (2017). Clade A contains only Ascoidea rubescence (Ascoideaceae) and is sister to Clade B, which has 43 species of Saccharomycetaceae, Saccharomycodaceae, and Phaffomycetaceae. Clade C consists of 11 species of Pichiaceae and 22 CUG-Ser2 species (Shen et al. 2016; Shen et al. 2017). Clade D is the outgroup consisting of 9 species. Clade A + B received 100% bootstrap support in the concatenated supermatrix analysis (Shen et al. 2017). Contrasting evolutionary relationships of three clades (A, B, and C) are shown in panels b and c, along with their bootstrap supports for clades A + B (100%) and B + C (46%).