Table 1.

Software framework R libraries

Library	Purpose	R library dependencies
ready4	Provide a template and novel syntax for modular CHEM implementations and tools for finding interoperable CHEM modules, datasets and reproducible analysis programs	dataverse dplyr gh kableExtra lifecycle magrittr methods piggyback purrr rlang rvest stats stringi stringr tibble tidyRSS tidyselect tools utils
ready4fun	Streamline and standardise the authoring and documenting of functions that support transferable and generalisable model algorithms.	desc devtools dplyr gert Hmisc lifecycle lubridate magrittr methods piggyback pkgdown purrr readxl ready4 ready4show ready4use rlang sinew stats stringi stringr testit tibble tidyr tools usethis utils xfun
ready4class	Streamline and standardise the authoring and documenting of new interoperable CHEM modules	devtools dplyr fs gtools Hmisc knitr lifecycle magrittr methods purrr ready4 ready4fun ready4show rlang stats stringi stringr testit testthat tibble tidyr usethis utils
ready4pack	Help bundle and disseminate newly created CHEM modules as R libraries that are documented, licensed and quality assured	dataverse dplyr knitr lifecycle magrittr methods purrr ready4 ready4class ready4fun rlang stringr testthat tibble tidyr utils
ready4use	Help manage the labelling and transfer of data between CHEM modules and local and remote data repositories	data.table dataverse dplyr fs Hmisc knitr lifecycle magrittr methods piggyback purrr readxl ready4 ready4show rlang stats stringi stringr testit testthat tibble tidyr utils
ready4show	Facilitate the use of CHEM modules in programs to implement integrated and reproducible data ingest, analysis and reporting pipelines	dataverse DescTools dplyr flextable grDevices here Hmisc kableExtra knitr knitrBootstrap lifecycle magrittr methods officer purrr ready4 rlang rmarkdown stringi stringr testthat tibble tidyr utils xtable