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. 2023 Sep 4;42(7):1046–1050. doi: 10.1038/s41587-023-01937-y

Extended Data Fig. 7. Joint embedding of gene and FMP-10 MSI peaks.

Extended Data Fig. 7

Force directed layout of 10K-nearest neighbors was run on cosine distance graph (represented by edge thickness and shade). Nodes (genes and peaks) were split in 18 spatially co-detected modules using the Spinglass algorithm (a) and by technology of origin (b). Genes and peaks whose expression were associated with dopamine (m/z 674.2805) were enriched in module 4 and shown in (c).