TABLE 1.
Taxonomy and genome characteristics of spore forming bacteriaa
| Isolate ID | GenBank accession | Taxon beyond class clostridia order eubacteriales | Closest ref genome | ANI | Sequencing | Contigs | N50 | Size | %GC | CDS | SRR | Illumina Paired-End read number | PacBio subread number | PacBio subread N50 | ONT read number | ONT read N50 | ONT flowcell |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| JLR.KK001 | JAYMNO000000000 |
f__Lachnospiraceae;
g__Sporofaciens sp. KK001 |
GCA_9105 74715.1 |
98.44 | Hybrid | 31 | 4,968,565 | 6,390,410 | 46% | 6,399 | SRR28014014, SRR28014007 | 4,717,052 | NA | NA | 26,547 | 7,327 | FLO-MIN106 |
| JLR.KK005 | JAYMNR000000000 |
f__Candidatus;
g__Ventrimonas sp. KK005 |
GCA_0099 11065.1 |
96.15 | Hybrid | 205 | 197,068 | 5,083,539 | 44% | 4,949 | SRR28014013, SRR28014006 | 3,632,234 | NA | NA | 15 | 4,054 | FLO-FLG001 |
| JLR.KK006 | JAYMNS000000000 |
f__Lachnospiraceae;
g__Candidatus Merdisoma sp. KK006 |
GCA_9105 74255.1 |
98.86 | Hybrid | 112 | 111,685 | 4,698,239 | 45% | 4,502 | SRR28014010, SRR28014005 | 5,151,028 | NA | NA | 77 | 3,513 | FLO-FLG001 |
| JLR.KK011 | JAYWSZ000000000 |
f__Lachnospiraceae;
g__Candidatus Merdisoma sp. KK011 |
GCA_9105 75725.1 |
98.57 | PacBio | 7 | 2,532,420 | 5,043,844 | 48% | 4,958 | SRR28516891 | NA | 92,862 | 11,648 | NA | NA | NA |
| JLR.KK002 | JAYMNP000000000 | f__Lachnospiraceae bacterium KK002 | GCF_0004 03845.2 |
88.4 | Hybrid | 5 | 4,212,295 | 4,276,026 | 46% | 4,102 | SRR28014009, SRR28014004 | 4,880,942 | NA | NA | 11,608 | 8,894 | FLO-MIN106 |
| JLR.KK008 | CP143548 | f__Lachnospiraceae bacterium KK008 | GCA_9105 85345.1 |
78.35 | PacBio | 1 | 3,188,748 | 3,188,748 | 48% | 3,078 | SRR28516890 | NA | 39,804 | 12,282 | NA | NA | NA |
| JLR.KK009 | CP143549 | f__Lachnospiraceae bacterium KK009 | GCA_0004 03315.2 |
99.31 | PacBio | 1 | 5,268,209 | 5,268,209 | 47% | 5,165 | SRR28516889 | NA | 81,055 | 12,085 | NA | NA | NA |
| JLR.KK004 | JAYMNQ000000000 |
f__Oscillospiraceae;
g__Acutalibacter sp. KK004 |
GCF_0099 36035.1 |
96.44 | Hybrid | 12 | 2,635,137 | 3,852,823 | 54% | 4,046 | SRR28014008, SRR28014003 | 3,640,502 | NA | NA | 15,286 | 8,990 | FLO-MIN106 |
| JLR.KK007 | JAYWSY000000000 |
f__Oscillospiraceae;
g__Lawsonibacter sp. KK007 |
GCA_9105 84605.1 |
98.48 | PacBio | 5 | 1,637,602 | 4,295,262 | 58% | 4,458 | SRR28516888 | NA | 109,452 | 12,756 | NA | NA | NA |
| JLR.KK010 | CP143550 | f__Eubacteriales Family XIII;g__Emergencia sp. KK010 | GCF_0099 36045.1 |
98.09 | PacBio | 1 | 3,076,573 | 3,076,573 | 44% | 2,874 | SRR28516887 | NA | 260,145 | 12,915 | NA | NA | NA |
a
NA = Not applicable.