TABLE 2.
| Strain | Size | Orientation | Location | int | tx | tx | tx | stl | str | xis | rep | ppi | pac | cpm | ptiA | ptiB | terS | ccm | HNH | cos | tx | tx | tx | tx | ada | scin | vwbP | Comment |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Group 1 - classical SaPIs | ||||||||||||||||||||||||||||
| 6850 (MSSA) | 16 | 3 to 5 | groEL | 1 | 0 | 0 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 0 | 0 | bcinIII | HP | HP | HP | 0 | 0 | 0 | |
| RF122 (SaPIbov1) | 15.5 | 5 to 3 | guaA | 1 | 0 | 0 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 0 | 0 | tst | bcnIIc | sec | sel | 0 | 0 | 0 | Bovine |
| RF122 (SapI122) | 16.5 | 3 to 5 | groEL | 1 | 0 | 0 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 0 | 0 | mdr | 0 | 0 | 0 | 0 | 0 | 0 | Bovine |
| BMB9393 | 14.8 | 5 to 3 | metQ | 1 | 0 | 0 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | |
| 55/2053 | 12.1 | 5 to 3 | metQ | 1 | 0 | 0 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | |
| TCH60 | 12.1 | 3 to 5 | metQ | 1 | 0 | 0 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | |
| SA957 (CA-MRSA) | 14.4 | 5 to 3 | metQ | 1 | sek | seq | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 0 | 0 | seb | ear | 0 | 0 | 0 | 0 | 0 | |
| n315 (SaPIn1) | 15.2 | 3 to 5 | groEL | 1 | 0 | 0 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 0 | 0 | tst | ear | sec | sel | 0 | 0 | 0 | |
| RN4282 (SaPI1 | 15.2 | 5 to 3 | metQ | 1 | sek | seq | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 0 | 0 | tst | ear | 0 | 0 | 0 | 0 | 0 | |
| RN3984 (SaPI2) | 15.3 | 3 to 5 | groEL | 1 | 0 | 0 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 0 | 0 | tst | eta | 0 | 0 | 0 | 0 | 0 | |
| COL (SaPI3) | 5 to 3 | metQ | 1 | 1 | 1 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 0 | 0 | seb | 0 | 0 | 0 | 0 | 0 | 0 | ||
| FDARGOS_5 | 3 to 5 | metQ | 1 | 1 | 0 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 0 | 0 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | ||
| MS4 | 15 | 5 to 3 | metQ | 1 | 1 | 0 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 0 | 0 | seb | 0 | 0 | 0 | 0 | 0 | 0 | |
| Z172 (MRSA/VISA) | 14.9 | 5 to 3 | metQ | 1 | sek | sel | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | |
| TO131/00383 | 10.6 | 5 to 3 | rpsR | 1 | 0 | 0 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | |
| TO131/00870 | 16.1 | 5 to 3 | rnr | 1 | 0 | 0 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 0 | 0 | eta | 0 | 0 | 0 | 0 | 0 | 0 | |
| TO131/00934 | 16.4 | 5 to 3 | metQ | 1 | 1 | 1 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | |
| TO131/02151 SaPI6D | 6 | 5 to 3 | groEL | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | |
| TO131/02158 | 12.8 | 3 to 5 | groEL | 1 | 0 | 0 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | |
| Group 2 - ccm-cos | ||||||||||||||||||||||||||||
| JP5338 (SaPIbov5) | 13.5 | 1 | 0 | 0 | 0 | 1 | 1 | 1 | 1 | 1 | 0 | 0 | 0 | 0 | 3′rem | 1 | 1 | 1 | 0 | 0 | 0 | 0 | 1 | 1 | 1 | Bovine | ||
| BA4 (SaPIbov4) | 13.9 | 1 | 0 | 0 | 0 | 1 | 1 | 1 | 1 | 1 | 0 | 0 | 0 | 0 | 3′rem | 1 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | Bovine | ||
| UTSW MRSA55 | 11.1 | 5 to 3 | metQ | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 0 | 0 | 0 | 3′rem | 1 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | |
| JE2 | 12.3 | 5 to 3 | metQ | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 0 | 0 | 0 | 3′rem | 1 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | |
| CZ406 | 12.3 | 5 to 3 | metQ | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 0 | 0 | 0 | 3′rem | 1 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | |
| M6 | 12 | 5 to 3 | guaA | 1 | 0 | 0 | 0 | 1 | 1 | 1 | 1 | 1 | 0 | 0 | 0 | 0 | 1 | 1 | 1 | 0 | 0 | 0 | 0 | 1 | ? | 1 | Cow? to pig | |
| NX-T55 | 9 | 3 to 5 | guaA | 1 | 0 | 0 | 0 | 1 | 1 | 1 | 1 | 1 | 0 | 0 | 0 | 0 | 3′rem | 1 | 1 | 1 | 0 | 0 | 0 | 0 | 1 | 1 | 1 | Animal defective? |
| USA300_TCH1516 | 12.9 | 5 to 3 | metQ | 1 | 1 | 1 | 0 | 1 | 1 | 1 | 1 | 1 | 0 | 0 | 0 | 0 | 3′rem | 1 | 1 | 1 | ear | 0 | 0 | 0 | 0 | 0 | 0 | |
| 08BA02176 | 13 | 5 to 3 | guaA | 1 | 0 | 0 | 0 | 1 | 1 | 1 | 1 | 1 | 0 | 0 | 0 | 0 | 3′rem | 1 | 1 | 1 | 0 | 0 | 0 | 0 | 1 | 1 | 1 | |
| MW2 | 13.8 | 5 to 3 | rnr | 1 | 0 | 0 | 0 | 1 | 1 | 1 | 1 | 1 | 0 | 0 | 0 | 0 | 3′rem | 1 | 1 | 1 | ear | sec | sel | 0 | 0 | 0 | 0 | |
| ST398(MRSA) | 12.3 | 5 to 3 | guaA | 1 | 0 | 0 | 0 | 1 | 1 | 1 | 1 | 1 | 0 | 0 | 0 | 0 | 3′rem | 1 | 1 | 1 | 0 | 0 | 0 | 0 | 1 | 1 | 1 | Animal strain causing human endocarditis |
| ED133 | 14.1 | 5 to 3 | guaA | 1 | 0 | 0 | 0 | 1 | 1 | 1 | 1 | 1 | 0 | 0 | 0 | 0 | 3′rem | 1 | 1 | 1 | tst | sec | sel | 0 | 0 | 0 | 0 | Ovine |
| ED133 | 10.1 | 3 to 5 | groEL | 1 | 0 | 0 | 0 | 1 | 1 | 1 | 1 | 1 | 0 | 0 | 0 | 0 | 3′rem | 1 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | Ovine |
| AR0223 | 11.1 | 3 to 5 | metQ | 1 | 1 | 1 | 0 | 1 | 1 | 1 | 1 | 1 | 0 | 0 | 0 | 0 | 3′rem | 1 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | |
a
Abbreviations: MSSA, methicillin-susceptible S. aureus; MRSA, methicillin-resistant S. aureus; CA-MRSA, community-acquired, MSSA; VISA, vancomycin-intermediate S. aureus; vWBP, von Willebrand factor binding protein
b
1, the presence of a gene; 0, the absence of a gene.