Table 2.
DEG-DAPs expression correlation information of pathway structure genes.
| Gene_id(name) | Protein_id(name) | pathway | DEG_cluster | DAP_cluster | Expression correlation |
|---|---|---|---|---|---|
| TRINITY_DN18158_c2_g2(PhCAD3) | TRINITY_DN18158_c2_g2_i7_m.423581(PhCAD1) | cell wall | G6 | P8 | —— |
| TRINITY_DN16285_c1_g1(PhPAL2) | TRINITY_DN16285_c1_g1_i2_m.19561(PhPAL) | cell wall | G8 | P5 | —— |
| TRINITY_DN10247_c2_g2(PhPRX1) | TRINITY_DN10247_c2_g2_i1_m.94858(PhPRX1) | cell wall | G7 | P3 | CK_vs_ABA_DEG up DAP down |
| TRINITY_DN10247_c2_g6(PhPRX2) | TRINITY_DN10247_c2_g6_i2_m.94881(PhPRX2) | cell wall | G7 | P1 | —— |
| TRINITY_DN10367_c6_g2(PhPRX3) | TRINITY_DN10367_c6_g2_i2_m.429931(PhPRX3) | cell wall | G7 | P8 | CK_vs_ABA_DEG up DAP down |
| TRINITY_DN10367_c7_g6(PhPRX4) | TRINITY_DN10367_c7_g6_i1_m.429944(PhPRX4) | cell wall | G5 | P8 | ABA_vs_NaW_DEG up DAP down |
| TRINITY_DN10453_c1_g1(PhPRX5) | TRINITY_DN10453_c1_g1_i1_m.1623(PhPRX5) | cell wall | G5 | P3 | CK_vs_NaW_DEG down DAP down |
| TRINITY_DN10551_c3_g2(PhPRX7) | TRINITY_DN10551_c3_g2_i3_m.176623(PhPRX6) | cell wall | G6 | P8 | —— |
| TRINITY_DN10572_c0_g1(PhPRX8) | TRINITY_DN10572_c0_g1_i1_m.175326(PhPRX7) | cell wall | G4 | P2 | CK_vs_NaW_DEG up DAP up |
| TRINITY_DN10572_c2_g1(PhPRX10) | TRINITY_DN10572_c2_g1_i2_m.175334(PhPRX8) | cell wall | G4 | P6 | CK_vs_NaW_DEG up DAP down |
| TRINITY_DN11441_c0_g4(PhPRX13) | TRINITY_DN11441_c0_g4_i1_m.207802(PhPRX9) | cell wall | G4 | P6 | CK_vs_NaW_DEG up DAP down |
| TRINITY_DN11537_c0_g5(PhPRX14) | TRINITY_DN11537_c0_g5_i1_m.136318(PhPRX10) | cell wall | G2 | P8 | ABA_vs_NaW_DEG down DAP down, CK_vs_ABA_DEG up DAP down |
| TRINITY_DN11754_c1_g1(PhPRX15) | TRINITY_DN11754_c1_g1_i2_m.287462(PhPRX11) | cell wall | G6 | P3 | CK_vs_NaW_DEG down DAP down |
| TRINITY_DN17798_c0_g1(PhPRX23) | TRINITY_DN17798_c0_g1_i3_m.459779(PhPRX12) | cell wall | G3 | P8 | CK_vs_ABA__DEG down DAP down |
| TRINITY_DN18092_c1_g1(PhPRX24) | TRINITY_DN18092_c1_g1_i3_m.24007(PhPRX13) | cell wall | G3 | P8 | CK_vs_NaW_DEG down DAP down |
| TRINITY_DN15089_c2_g4(PhCHS4) | TRINITY_DN15089_c2_g4_i1_m.108148(PhCHS) | cell wall | G7 | P1 | ABA_vs_NaW_DEG up DAP down |
| TRINITY_DN16221_c0_g1(PhFLS1) | TRINITY_DN16221_c0_g1_i1_m.19878(PhFLS) | cell wall | G1 | P7 | ABA_vs_NaW_DEG down DAP down, CK_vs_ABA_DEG down DAP up |
| TRINITY_DN15182_c3_g2(PhPE2) | TRINITY_DN15182_c3_g2_i1_m.276189(PhPE) | cell wall | G5 | P5 | ABA_vs_NaW_DEG up DAP up |
| TRINITY_DN15700_c4_g1(PhXTH7) | TRINITY_DN15700_c4_g1_i1_m.69573(PhXTH1) | cell wall | G1 | P1 | ABA_vs_NaW_DEG down DAP down |
| TRINITY_DN18842_c4_g1(PhXTH10) | TRINITY_DN18842_c4_g1_i2_m.311198(PhXTH2) | cell wall | G4 | P7 | CK_vs_NaW_DEG up DAP up, ABA_vs_NaW_DEG down DAP down |
| TRINITY_DN13969_c2_g2(PhCS4) | TRINITY_DN13969_c2_g2_i1_m.386260(PhCS) | cell wall | G5 | P8 | ABA_vs_NaW_DEG up DAP down |
| TRINITY_DN11518_c0_g3(PhADPGase) | TRINITY_DN11518_c0_g3_i1_m.137000(PhADPGase1) | starch | G1 | P4 | —— |
| TRINITY_DN18110_c2_g1(PhFK3) | TRINITY_DN18110_c2_g1_i1_m.426134(PhFK) | starch | G4 | P8 | ABA_vs_NaW_DEG down DAP down |
| TRINITY_DN17637_c0_g1(PhSSI2) | TRINITY_DN17637_c0_g1_i1_m.117613(PhSSI1) | starch | G2 | P4 | —— |
| TRINITY_DN11765_c2_g1(PhSusy1) | TRINITY_DN11765_c2_g1_i1_m.290159(PhSusy1) | starch | G1 | P5 | ABA_vs_NaW_DEG down DAP up |
| TRINITY_DN12800_c0_g1(PhSusy2) | TRINITY_DN12800_c0_g1_i3_m.437823(PhSusy2) | starch | G7 | P5 | CK_vs_NaW_DEG up DAP down |
| TRINITY_DN13032_c1_g1(PhSusy3) | TRINITY_DN13032_c1_g1_i4_m.294032(PhSusy3) | starch | G1 | P8 | CK_vs_ABA__DEG down DAP down |
| TRINITY_DN13032_c1_g1_i5_m.294045(PhSusy4) | P1 | —— | |||
| TRINITY_DN9947_c1_g2(PhSusy4) | TRINITY_DN9947_c1_g2_i2_m.121314(PhSusy5) | starch | G1 | P5 | ABA_vs_NaW_DEG down DAP up |
| TRINITY_DN16489_c0_g5(PhAAO3) | TRINITY_DN16489_c0_g5_i1_m.115819(PhAAO3) | plant hormone | G5 | P1 | ABA_vs_NaW_DEG up DAP down |
| TRINITY_DN17406_c2_g1(PhSnRK2) | TRINITY_DN17406_c2_g1_i1_m.379082(PhSnRK2) | plant hormone | G6 | P5 | CK_vs_NaW_DEG down DAP down |
| TRINITY_DN12672_c2_g2(PhACO1) | TRINITY_DN12672_c2_g2_i2_m.75444(PhACO) | plant hormone | G4 | P7 | CK_vs_NaW_DEG up DAP up, ABA_vs_NaW_DEG down DAP down |
| TRINITY_DN15210_c3_g1(PhAOC1) | TRINITY_DN15210_c3_g1_i5_m.300424(PhAOC1) | plant hormone | G5 | P6 | CK_vs_NaW_DEG down DAP down, ABA_vs_NaW_DEG up DAP up |
| TRINITY_DN13828_c1_g1(PhAOC2) | TRINITY_DN13828_c1_g1_i13_m.150776(PhAOC2) | plant hormone | G6 | P3 | CK_vs_NaW_DEG down DAP down |
| TRINITY_DN13310_c0_g2(PhAOS1) | TRINITY_DN13310_c0_g2_i1_m.392513(PhAOS) | plant hormone | G5 | P8 | —— |
| TRINITY_DN10349_c2_g1(PhLOX3) | TRINITY_DN10349_c2_g1_i8_m.433148(PhLOX1) | plant hormone | G5 | P6 | CK_vs_NaW_DEG down DAP down |
| TRINITY_DN14950_c1_g1(PhLOX5) | TRINITY_DN14950_c1_g1_i4_m.157306(PhLOX2) | plant hormone | G5 | P6 | CK_vs_NaW_DEG down DAP down, ABA_vs_NaW_DEG up DAP up |
| TRINITY_DN12956_c1_g1(PhLOX7) | TRINITY_DN12956_c1_g1_i1_m.79217(PhLOX3) | plant hormone | G5 | P5 | ABA_vs_NaW_DEG up DAP up |
| TRINITY_DN12956_c1_g3(PhLOX8) | TRINITY_DN12956_c1_g3_i1_m.79225(PhLOX4) | plant hormone | G6 | P5 | CK_vs_NaW_DEG down DAP down |
| TRINITY_DN17848_c3_g1(PhLOX12) | TRINITY_DN17848_c3_g1_i3_m.449700(PhLOX5) | plant hormone | G7 | P8 | —— |