Table 1.
Sequencing statistics for new and previously published CVI988 and Md5 consensus genomes.
| MDV strain | Number of MDV-specific reads | Number of reads used for assembly | Coverage | GenBank accession | Genome length (bp) | Prior citation |
|---|---|---|---|---|---|---|
| CVI988GenBank.BAC | N/A | N/A | 6× | DQ530348 | 178 311 | Spatz et al. (2007a) |
| CVI988USDA.PA.field | 227 487 | 138 122 | 149× | PP032833 | 176 946 | – |
| CVI988Pirbright.lab | 11 997 583a | 9 730 216 | 10 055× | PP032835 | 176 532 | – |
| Md5Genbank | N/A | N/A | 6× | NC_002229 | 177 874 | Tulman et al. (2000) |
| Md5USDA.lab | 1 030 131 | 727 124 | 793× | PP032832 | 176 724 | – |
| Md5Pirbright.lab | 10 138 498a | 8 296 132 | 8530× | PP032834 | 178 276 | – |
a
The UK viral stock populations were subjected to oligo-bait-based enrichment to increase the yield of viral DNA (Trimpert et al. 2017, Shipley et al. 2020).