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. 2024 Jun 26;52(13):7720–7739. doi: 10.1093/nar/gkae540

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© The Author(s) 2024. Published by Oxford University Press on behalf of Nucleic Acids Research.

This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (https://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com

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Figure 9. — Pediatric KS tissue samples exhibiting long-range KSHV transcripts. (A) IGV panel displaying different short and long-range spliced transcripts originating from the two TSSs located in the latency region. (B, C) Number of pediatric KS tissue samples (SRA BioProject PRJNA975091) that were detected positive for RNA-Seq reads uniquely mapping across the splice junction (SJ) of TRIMD-identified long-range transcripts with (B) TSS at nt. 119010 and splice donor bases (GU) at nt. 118906 and (C) TSS at nt. 124005 and splice donor bases (GU) at nt. 123842.