Table 3.
Results from genome gazing at the genes present and unique to strain Vibrio vulnificus JY1701 and not present in strains V. vulnificus 27562T or WR2‐BW.
| Gene number in V. vulnificus JY1701 | Length of gene (No. amino acids) | Function of gene |
|---|---|---|
| 424 | 53 | Type cbb3 cytochrome oxidase biogenesis protein CcoI; Copper‐translocating P‐type ATPase (EC 3.6.3.4) |
| 479 | 210 | TonB‐dependent receptor |
| 480 | 483 | TonB‐dependent receptor |
| 483 | 147 | Putative membrane protein |
| 520 | 46 | Maltoporin (maltose/maltodextrin high‐affinity receptor, phage lambda receptor protein) |
| 615 | 41 | 2‐oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) |
| 689 | 152 | Rhs family protein |
| 1138 | 239 | Beta‐1,4‐galactosyltransferase |
| 1141 | 393 | UDP‐Bac2Ac4Ac hydrolyzing 2‐epimerase NeuC homolog |
| 1143 | 213 | 4‐amino‐6‐deoxy‐N‐Acetyl‐d‐hexosaminyl‐(Lipid carrier) acetyltransferase |
| 1149 | 77 | Acyl carrier protein, putative |
| 1152 | 672 | Acyl protein synthase/acyl‐CoA reductase RfbN |
| 1153 | 131 | Acyl protein synthase/acyl‐CoA reductase RfbN |
| 1155 | 325 | Polysaccharide deacetylase |
| 1171 | 141 | S‐adenosylhomocysteine hydrolase |
| 1175 | 135 | Structural protein P5 |
| 1178 | 157 | Methyl‐accepting chemotaxis protein |
| 1179 | 124 | Mg‐dependent DNase |
| 1183 | 278 | Outer membrane receptor protein |
| 1446 | 51 | Neopullulanase (EC 3.2.1.135) |
| 1791 | 266 | Arginine/ornithine antiporter ArcD |
| 2057 | 65 | Lipid carrier: UDP‐N‐acetylgalactosaminyltransferase (EC 2.4.1.‐)/Alpha‐1,3‐N‐acetylgalactosamine transferase PglA (EC 2.4.1.‐); Putative glycosyltransferase |
| 2061 | 388 | Glycosyl transferase, group 1 |
| 2063 | 417 | WzxE protein |
| 2215 | 931 | Chromosome segregation ATPases |
| 2267 | 587 | DNA double‐strand break repair Rad50 ATPase |
| 2284 | 290 | EF‐hand domain protein |
| 2623 | 738 | Translation‐disabling ACNase RloC |
| 2674 | 118 | ORF2 |
| 2991 | 637 | DNA helicase II‐related protein |
| 3371 | 288 | Putative integrase |
| 3374 | 420 | Virulence‐associated E |
| 3459 | 297 | Type III restriction‐modification system methylation subunit (EC 2.1.1.72) |
| 3460 | 330 | Type III restriction‐modification system methylation subunit (EC 2.1.1.72) |
| 3461 | 799 | Type III restriction‐modification system DNA endonuclease res (EC 3.1.21.5) |
| 3636 | 38 | Trehalose‐6‐phosphate hydrolase (EC 3.2.1.93) |
| 3686 | 264 | Putative alpha‐dextrin endo‐1, 6‐alpha‐glucosidase |
| 3890 | 161 | GCN5‐related N‐acetyltransferase |
| 3967 | 40 | Alcohol dehydrogenase (EC 1.1.1.1) |
| 4081 | 176 | Predicted transcriptional regulator |
| 4082 | 302 | Predicted nucleotide‐binding protein |
| 4259 | 445 | Articulin, putative |
| 4314 | 265 | Putative type II restriction endonuclease |
| 4334 | 141 | Putative glyoxalase |
| 4402 | 224 | HAD superfamily hydrolase |
| 4425 | 159 | Putative acetyltransferase |
| 4461 | 79 | T1SS secreted agglutinin RTX |
Note: The genes in this table are genes with known functions. Hypothetical proteins, genes with unknown function, or phage‐related genes are not included. Bolded genes indicate genes that may have a possible virulence‐related function.