Table 2.
Meta-regression of Additive Count Number Variation effects in all cases and controls, analyzed using General Linear Regression modelling after control of first three intra-ethnic Principal Components.
| Allele | Effect | Std. Error | P-value | P-value FDR corrected | Direction* | Heterogeneity P-value |
|---|---|---|---|---|---|---|
| KIR2DL3 | -0.055 | 0.040 | 0.1743 | 0.3835 | —+ | 0.9663 |
| KIR2DS3T | 0.022 | 0.017 | 0.2016 | 0.4032 | ?+-++ | 0.7370 |
| KIR2DL1 | 0.024 | 0.033 | 0.4665 | 0.6842 | ++–+ | 0.8283 |
| KIR2DL2 | 0.055 | 0.040 | 0.1719 | 0.3835 | ++++- | 0.9571 |
| KIR2DS4Del | -0.002 | 0.044 | 0.9714 | 0.9714 | +–+- | 0.8354 |
| KIR2DL5 | 0.037 | 0.050 | 0.4628 | 0.6842 | ++— | 0.7386 |
| KIR3DL2 | N/A | N/A | N/A | N/A | N/A | N/A |
| KIR2DP1 | 0.009 | 0.033 | 0.7786 | 0.9714 | -+–+ | 0.7344 |
| KIR2DL5B | 0.101 | 0.028 | 0.0003 | 0.0056 | +++– | 0.1845 |
| KIR2DL4 | 0.041 | 0.016 | 0.0108 | 0.1191 | -++++ | 0.2680 |
| KIR3DL3 | N/A | N/A | N/A | N/A | N/A | N/A |
| KIR2DS3 | 0.054 | 0.037 | 0.1459 | 0.3835 | ++— | 0.7279 |
| KIR2DS3C | 0.044 | 0.031 | 0.1511 | 0.3835 | +++– | 0.8106 |
| KIR2DS5 | -0.006 | 0.033 | 0.8523 | 0.9714 | +— | 0.9992 |
| KIR2DS1 | -0.041 | 0.034 | 0.2214 | 0.4059 | +— | 0.5479 |
| KIR3DS1 | 0.003 | 0.030 | 0.9148 | 0.9714 | +—+ | 0.7697 |
| KIR3DL1 | 0.056 | 0.036 | 0.1182 | 0.3835 | +++++ | 0.9586 |
| KIR2DS4wt | 0.055 | 0.039 | 0.1558 | 0.3835 | -++-+ | 0.5115 |
| KIR2DS2 | 0.058 | 0.040 | 0.1439 | 0.3835 | ++++- | 0.8043 |
| KIR2DS5C | 0.011 | 0.007 | 0.1234 | 0.3835 | -+— | 0.6663 |
| KIR2DS5T | 0.005 | 0.028 | 0.8687 | 0.9714 | +-+-+ | 0.7893 |
| KIR2DL5A | -0.031 | 0.034 | 0.3713 | 0.6284 | +—+ | 0.5406 |
N/A, not applicable.
*Order of cohorts: African, European, Asian, African-European, Asian-European; “+”, increased in cases; “-”, decreased in cases; “?”, not examined in cohort and thus has a smaller corresponding weight.
Bold values means significant.